y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os02g09430.1 |
Family | GT47 |
Protein Properties | Length: 403 Molecular Weight: 45649.6 Isoelectric Point: 9.3375 |
Chromosome | Chromosome/Scaffold: 2 Start: 4838492 End: 4841905 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 78 | 355 | 0 |
ERSFKVYMYPDGDPKTFYQTPRKLTGKYASEGYFFQNIRESRFRTGDPDKAHLFFVPISPHKMRGKGTSYENMTIIVKDYVEGLINKYPYWNRTLGADHF FVTCHDVGVRAFEGLPFMVKNSIRVVCSPSYNVDFIPHKDIALPQVLQPFALPEGGNDVENRTILGFWAGHRNSKIRVILAQVWENDTELAISNNRISRA IGELVYQKQFYHTKFCICPGGSQVNSARISDSIHYGCVPVILSDYYDLPFNDILDWRKFAVVLKERDVYQLKSILKSI |
Full Sequence |
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Protein Sequence Length: 403 Download |
MAGRLPGAAS AAAAPLPRAL LLLAALALFS LTFLSLRSLR PAAAPPSLAI GGSRPSSFAR 60 PSVYHSAEAF AAGYAEMERS FKVYMYPDGD PKTFYQTPRK LTGKYASEGY FFQNIRESRF 120 RTGDPDKAHL FFVPISPHKM RGKGTSYENM TIIVKDYVEG LINKYPYWNR TLGADHFFVT 180 CHDVGVRAFE GLPFMVKNSI RVVCSPSYNV DFIPHKDIAL PQVLQPFALP EGGNDVENRT 240 ILGFWAGHRN SKIRVILAQV WENDTELAIS NNRISRAIGE LVYQKQFYHT KFCICPGGSQ 300 VNSARISDSI HYGCVPVILS DYYDLPFNDI LDWRKFAVVL KERDVYQLKS ILKSISQEEF 360 VELHKSLVQV QKHFVWHSPP LPYDAFHMVM YELWLRHHVI KY* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-60 | 77 | 355 | 297 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0008150 | biological_process |
GO:0008152 | metabolic process |
GO:0009536 | plastid |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG33948.1 | 0 | 1 | 402 | 1 | 403 | exostosin-like [Zea mays] |
GenBank | EAZ22017.1 | 0 | 1 | 402 | 1 | 408 | hypothetical protein OsJ_05674 [Oryza sativa Japonica Group] |
RefSeq | NP_001046127.1 | 0 | 1 | 402 | 1 | 402 | Os02g0187200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132213.1 | 0 | 1 | 402 | 1 | 403 | hypothetical protein LOC100193644 [Zea mays] |
RefSeq | XP_002453426.1 | 0 | 1 | 402 | 1 | 403 | hypothetical protein SORBIDRAFT_04g005890 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |