y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000236176 |
Family | GT47 |
Protein Properties | Length: 706 Molecular Weight: 80225.9 Isoelectric Point: 8.3475 |
Chromosome | Chromosome/Scaffold: 002032246 Start: 49 End: 6511 |
Description | DDT domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 583 | 693 | 1e-29 |
EKVFKIYVYEEGEVPIFHDGPCRSIYSSEGRFIHEMEKGKMYRTKDPHKALVYFLPFSVVNMVQYIYMPETFDRSGMKRAVVDYINLISHKHPFWNRSLG ADHFMLSCHDW |
Full Sequence |
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Protein Sequence Length: 706 Download |
ADDPVFTDRP SPLTDFNVPM ECVGDLLMVW DFCSSFGRLL HLWPFSLEDF ENAICHKMGN 60 LILLVETHSA LLRLLMKDND EYSSTIRKRN RKLKITLITW TEYLCDFLDM VNSSELRGYI 120 ATIKRGHYGI LDAHAKLLIL RELVSHALET NTLREKLAKF VEQRQALGAT IRGEALEEAR 180 KKREEKDRLK AEYDPNQVVD LESNGSASTN GLTMSFFISN SESNQIDNAP KKTARKQNLE 240 XDIPIPNGKG LSEKDPHERS RDDRKEVTGM KSKEQRKEYY EREIEKRVIR TNSLGKDRNY 300 NRYWWFQRDG RIFVESSDSK QWGYYSSKEE LYLLIGSLNC KGERERALKK QLEKFNSRIC 360 LEMEKRSRDL VQEVALEEAV LRRSSRDIGG GDLQVGMRPS RHKPVSSLSS ILVGLILVVT 420 LAVILLAISS AFSSSSSSEI TSTVAAASAA TGDSLPALSS AQPPPPPQPP LLTTAAAAPA 480 PAPSPAPQIL AADVLQETII QKVEGDXTNY TAKKNDDVAN RTVFISGSQL DKVEASLGRA 540 RSSIREAALV RNKTSTHQDP DYVPRGPIYR NPNAFHRSYL EMEKVFKIYV YEEGEVPIFH 600 DGPCRSIYSS EGRFIHEMEK GKMYRTKDPH KALVYFLPFS VVNMVQYIYM PETFDRSGMK 660 RAVVDYINLI SHKHPFWNRS LGADHFMLSC HDWVQSNIFM ITRPFI 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-11 | 582 | 698 | 124 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
smart00571 | DDT | 2.0e-14 | 20 | 81 | 64 | + domain in different transcription and chromosome remodeling factors. | ||
pfam02791 | DDT | 1.0e-18 | 20 | 81 | 62 | + DDT domain. This domain is approximately 60 residues in length, and is predicted to be a DNA binding domain. The DDT domain is named after (DNA binding homeobox and Different Transcription factors). It is exclusively associated with nuclear domains, and is thought to be arranged into three alpha helices. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10012.1 | 0 | 3 | 388 | 280 | 702 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_196480.2 | 0 | 3 | 386 | 280 | 700 | DDT domain-containing protein [Arabidopsis thaliana] |
RefSeq | XP_002272046.1 | 0 | 2 | 386 | 297 | 674 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325278.1 | 0 | 1 | 386 | 253 | 593 | nucleosome/chromatin assembly factor group [Populus trichocarpa] |
RefSeq | XP_002513258.1 | 0 | 2 | 386 | 274 | 695 | conserved hypothetical protein [Ricinus communis] |