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Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s354_12V6.1 |
Family | GT47 |
Protein Properties | Length: 585 Molecular Weight: 67196.8 Isoelectric Point: 9.1537 |
Chromosome | Chromosome/Scaffold: 354 Start: 203050 End: 205991 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 235 | 521 | 0 |
QKTFKVYVYKDGYKPLVHAAKTGGIYATEGLFLKRMDDPGNRYTVSDPTQAHMFLLPYSVRQLVDFIQDPYSRSMRPLKTFIANYVERITSKYPYWNRTR GADHFFVSCHDWAPLSTILHDELHNNSMKVVCNADLTANFDIQKDVSIPQAVKGGNQSELDIDNLPPGKRDYLAFYAGQMHGLVRPVLIQHWRGKDSSMK VYEVLPPEIAKNISYAQHMKRSKFCLCPKGFEVNSPRIVEAILSGCVPVIIADNFVLPFSNVLDWSKFSITVEEKDIPNLKRILTNV |
Full Sequence |
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Protein Sequence Length: 585 Download |
MREKRIKSCA ESDALLTPAI KMGDTSGYFS MPYTAEYEAE VAISVDDFMR PSNVGLSYSK 60 QSVLNRGRKG GRSANLPNKG HDQQSFYHLQ HRYTKMFSWP IIAIMIGILF VLVMFRGFAL 120 PRMATGTKAS DQNFEELDGL SSTESRLDEK FNARIPRVII KKNHERTENI GMVFRQKVFD 180 TLQGFLLQVS RHSHLRDDGS GDAKGKSEDT VSSVHKQHEV YHNFHHFIKT YAEMQKTFKV 240 YVYKDGYKPL VHAAKTGGIY ATEGLFLKRM DDPGNRYTVS DPTQAHMFLL PYSVRQLVDF 300 IQDPYSRSMR PLKTFIANYV ERITSKYPYW NRTRGADHFF VSCHDWAPLS TILHDELHNN 360 SMKVVCNADL TANFDIQKDV SIPQAVKGGN QSELDIDNLP PGKRDYLAFY AGQMHGLVRP 420 VLIQHWRGKD SSMKVYEVLP PEIAKNISYA QHMKRSKFCL CPKGFEVNSP RIVEAILSGC 480 VPVIIADNFV LPFSNVLDWS KFSITVEEKD IPNLKRILTN VPDGTYRSMQ SCLKYIRRHF 540 VWLEDQEDTQ YDSFHMTMYS IWRQSLNLKN KLEVFQGHIL PTEN* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-63 | 234 | 521 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF70140.1 | 0 | 220 | 567 | 183 | 529 | exostosin family protein [Musa balbisiana] |
RefSeq | XP_001769276.1 | 0 | 202 | 576 | 28 | 404 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781687.1 | 0 | 226 | 567 | 21 | 361 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783154.1 | 0 | 234 | 584 | 1 | 351 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783155.1 | 0 | 3 | 229 | 116 | 342 | predicted protein [Physcomitrella patens subsp. patens] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |