y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.E03530.1 |
Family | GT47 |
Protein Properties | Length: 471 Molecular Weight: 54463.6 Isoelectric Point: 9.8952 |
Chromosome | Chromosome/Scaffold: 5 Start: 60295900 End: 60298779 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 137 | 422 | 0 |
KRFKIWTYREGDLPLVHYGPMRGLYGIEGQFIDEMEDKQNPFRARRPDEAHAFFLPFSVANVINYVYKPILSMSDYSRERLQRFAGDYISVVADRYRYWN RSGGADHFMASCHDWGPDISSANRELFKNFIRVLCNANTSEGFRPEIDVSMAEVYLTRGKLGPPRLGLDPSNRTILAFFAGGAHGFIRELLLEHWKDKDA DVQVHEYLPKGQHYTQLMGKSKFCLCPSGFEVASPRIVESIYAGCVPVIIKDDYWLPFSDVLNWSKFSIQIPVKKIKDIKTILQAI |
Full Sequence |
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Protein Sequence Length: 471 Download |
MSSMNFPYSQ FLLIPAISLI LLLVFLYYTP FNGNHDNPVS DLSFSYNSLK IRPSSSAVNE 60 LLSTSTYKSS SRHNTSRIKK KSSLDRIEDD LAQARAAIRK AIRSRSYVSN KEETFIPRGN 120 VYRNHYAFHQ SHIEMMKRFK IWTYREGDLP LVHYGPMRGL YGIEGQFIDE MEDKQNPFRA 180 RRPDEAHAFF LPFSVANVIN YVYKPILSMS DYSRERLQRF AGDYISVVAD RYRYWNRSGG 240 ADHFMASCHD WGPDISSANR ELFKNFIRVL CNANTSEGFR PEIDVSMAEV YLTRGKLGPP 300 RLGLDPSNRT ILAFFAGGAH GFIRELLLEH WKDKDADVQV HEYLPKGQHY TQLMGKSKFC 360 LCPSGFEVAS PRIVESIYAG CVPVIIKDDY WLPFSDVLNW SKFSIQIPVK KIKDIKTILQ 420 AIPNQKYVKL QKRVVKVTRH FELHRPAKPF DVIHMILHSV WLRRLNLKLE * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-62 | 135 | 422 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP03873.1 | 0 | 61 | 469 | 213 | 613 | Exostosin-like [Medicago truncatula] |
EMBL | CBI21065.1 | 0 | 77 | 469 | 8 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 58 | 469 | 58 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 78 | 469 | 1 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002531945.1 | 0 | 3 | 469 | 2 | 450 | catalytic, putative [Ricinus communis] |