y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000268076 |
Family | GT47 |
Protein Properties | Length: 466 Molecular Weight: 53181.1 Isoelectric Point: 8.7255 |
Chromosome | Chromosome/Scaffold: 001665416 Start: 5410 End: 17153 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 283 | 0 |
EAKFKVYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESHFRTDDPDQAHLFFIPISSHKMRGKGASYENMTIIVRDYVESLISKYPYWNRTLGADHF FVTCHDVGVRATEGLPLLVKNSIRVVCSPXYDVGFIPHKDVALPQVLQPFALPAGGNDVENRTTLGFWAGHRNSKIRVILARVWENDTELYILNNRINRA EGNLLYQRKFYETKFCICPGGSQVNSARPTDAIHYGCIPGKNSVILSNYYDLPFNDILDWRKFAVILREKDVYQLKQILKDI |
Full Sequence |
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Protein Sequence Length: 466 Download |
MEAKFKVYIY PDGDPNTFYQ TPRKLTGKYA SEGYFFQNIR ESHFRTDDPD QAHLFFIPIS 60 SHKMRGKGAS YENMTIIVRD YVESLISKYP YWNRTLGADH FFVTCHDVGV RATEGLPLLV 120 KNSIRVVCSP XYDVGFIPHK DVALPQVLQP FALPAGGNDV ENRTTLGFWA GHRNSKIRVI 180 LARVWENDTE LYILNNRINR AEGNLLYQRK FYETKFCICP GGSQVNSARP TDAIHYGCIP 240 GKNSVILSNY YDLPFNDILD WRKFAVILRE KDVYQLKQIL KDIPYSEFLT LHKNLVKVQQ 300 HFQWNSPPVK YDAFHMVICS LGPAREVCAR PACNATNASL ACPHALLSHP AELVCPATCF 360 GDRACGSIQP EATSNDSDYD HRFRDRLRRA PLAPAGRQFD ERPRAANRLS EPTPQVKRSH 420 EARPTRRSSS EAPEQVAIWR TEEGTRAVQL KFHWQSQLSA MTSSTE 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-56 | 1 | 283 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38234.1 | 0 | 1 | 321 | 1 | 317 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266299.1 | 0 | 1 | 321 | 91 | 407 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268836.1 | 0 | 1 | 321 | 92 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303415.1 | 0 | 1 | 327 | 1 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522880.1 | 0 | 1 | 321 | 81 | 397 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH770778 | 279 | 17 | 295 | 0 |
EE663633 | 245 | 62 | 306 | 0 |
GO268625 | 273 | 1 | 273 | 0 |
EX317869 | 282 | 26 | 307 | 0 |
GT802014 | 264 | 5 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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