y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28543.m000387 |
Family | GT47 |
Protein Properties | Length: 453 Molecular Weight: 51998 Isoelectric Point: 9.9252 |
Chromosome | Chromosome/Scaffold: 28543 Start: 31615 End: 33795 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 113 | 403 | 0 |
VYRNPYAFHQSHIEMEKKLKVWVHGGPVKNIYGVEGQFIDEMERGRSHFIARRPEEAQVFFLPVSVANIINFIYKPIVTYSRDQLQRLVTDYVGTVANKY PYWNRSSGADHFLVSCHDWAPDISTANPELYRNFIRVLCNANTSERFNPKRDVSIPEINIPSGKLGPPLHQASSPSNRTILAFFAGGSHGYIRKLLLEHW KGKDSEIQVHEYLDKKQNYFKLMGQSRFCLCPSGYEVASPRVVTAIQLGCVPVTISDNYTLPFSDILDWSKFSVHIPSGKIQEIKTILKGI |
Full Sequence |
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Protein Sequence Length: 453 Download |
MAMAIKFSNV HVVLPLALLA TVLFLYLSPL DQNKNITYDH CPTSANQENI QPSSSPNPLL 60 PTLTNPHQEK KKTGNLERIE DGLARARAAI HKAVESRNYS SYKEETYIPR GVVYRNPYAF 120 HQSHIEMEKK LKVWVHGGPV KNIYGVEGQF IDEMERGRSH FIARRPEEAQ VFFLPVSVAN 180 IINFIYKPIV TYSRDQLQRL VTDYVGTVAN KYPYWNRSSG ADHFLVSCHD WAPDISTANP 240 ELYRNFIRVL CNANTSERFN PKRDVSIPEI NIPSGKLGPP LHQASSPSNR TILAFFAGGS 300 HGYIRKLLLE HWKGKDSEIQ VHEYLDKKQN YFKLMGQSRF CLCPSGYEVA SPRVVTAIQL 360 GCVPVTISDN YTLPFSDILD WSKFSVHIPS GKIQEIKTIL KGISPRQYLK MHKRVMLVRR 420 HFMLNRPAQP FDMIHMMLHS IWLRRLNIRL PFS 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-63 | 127 | 403 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jhp_A | 0.002 | 238 | 379 | 329 | 457 | A Chain A, The Structure Of Bluetongue Virus Vp4 Reveals A Multifunctional Rna-capping Production-line |
PDB | 2jhc_A | 0.002 | 238 | 379 | 329 | 457 | A Chain A, The Structure Of Bluetongue Virus Vp4 Reveals A Multifunctional Rna-capping Production-line |
PDB | 2jha_A | 0.002 | 238 | 379 | 329 | 457 | A Chain A, The Structure Of Bluetongue Virus Vp4 Reveals A Multifunctional Rna-capping Production-line |
PDB | 2jh9_A | 0.002 | 238 | 379 | 329 | 457 | A Chain A, The Structure Of Bluetongue Virus Vp4 Reveals A Multifunctional Rna-capping Production-line |
PDB | 2jh8_A | 0.002 | 238 | 379 | 329 | 457 | A Chain A, The Structure Of Bluetongue Virus Vp4 Reveals A Multifunctional Rna-capping Production-line |