y
Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10010441m |
Family | GT47 |
Protein Properties | Length: 463 Molecular Weight: 53508.5 Isoelectric Point: 9.3489 |
Chromosome | Chromosome/Scaffold: 1 Start: 25865391 End: 25868256 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 130 | 413 | 0 |
KRFKIWAYTEGELPIAHVGPTKHIYAIEGHFIDEMESGLSPFMARHPDEAHAFFVPISVTYIVEYVYRPITDYHRDRLVRIFNDYLRVVADRYPYWNRSA GADHFMVSCHDWAPQISHDNPEIYKNFIRVLCNANTSEGFNPIRDVPLPEFNLPPGYLTPTRIRKRTAQGASVFAFFAGGAHGDVRKLLFQHWKDKDDEI QVHEYLPKGQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV |
Full Sequence |
---|
Protein Sequence Length: 463 Download |
MANNNFSCHS LFLLLSTFLL LTIILFYFSS FNQKDFTDIF TLSTSFNHEQ ETSQITPRVN 60 IPPSNSTKNI KKKKSNLARI EADLVRARAA IREAIRTRKY SSDKNGSFIP RGSIYRNAYA 120 FHQSHVEMLK RFKIWAYTEG ELPIAHVGPT KHIYAIEGHF IDEMESGLSP FMARHPDEAH 180 AFFVPISVTY IVEYVYRPIT DYHRDRLVRI FNDYLRVVAD RYPYWNRSAG ADHFMVSCHD 240 WAPQISHDNP EIYKNFIRVL CNANTSEGFN PIRDVPLPEF NLPPGYLTPT RIRKRTAQGA 300 SVFAFFAGGA HGDVRKLLFQ HWKDKDDEIQ VHEYLPKGQD YMKTMRRSKF CLCPSGFEVA 360 SPRLVEAIYV GCVPVIISDH YALPFSDVLD WSQFSIQIPV DKILEIKTIL KGVSDDKYLE 420 LQKNVVQVQR HFVLNRPAKP FDALHMVIHS VWLKRLNVRM PI* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-58 | 128 | 413 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25537.1 | 0 | 32 | 461 | 29 | 476 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197526.4 | 0 | 59 | 461 | 13 | 408 | catalytic [Arabidopsis thaliana] |
Swiss-Prot | Q3E9A4 | 0 | 59 | 461 | 71 | 466 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
RefSeq | XP_002263848.1 | 0 | 72 | 461 | 2 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331028.1 | 0 | 128 | 461 | 1 | 333 | predicted protein [Populus trichocarpa] |