y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_005_00101.1 |
Family | GT47 |
Protein Properties | Length: 408 Molecular Weight: 47340.4 Isoelectric Point: 6.7481 |
Chromosome | Chromosome/Scaffold: 5 Start: 1069559 End: 1071004 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 76 | 357 | 0 |
EKMFKIFVYKEGELPMFHGGPCKNIYTTEGRFIQQMEIDTKFRTYDPDKAHVYFLPFSITKMVQYLYVPDSHDCNAIKQVVVDYVTVITNKHQYWNRSLG ADHFMLSCHDWGPMASSFVPDLYKNSIRVLCNANTSEGFDPSKDASLPEINLVTGELNNVIGGPPPYDRSILAFFAGKLHGHIRLILLEHWQNKDEDLQV YETLPKGVSYNEVMKKSKYCLCPSGFEVASPRVVEAIYAECVPVLISIDYIPPFSDVLNWDSFAVQVPVRDIPNLKKILMEI |
Full Sequence |
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Protein Sequence Length: 408 Download |
MQDENNGVEE SSLIIQEPSK LERLEANLTR ARTFIRNLEL NFTQTLRVNK EENEYIPQGD 60 VYNNASAFHK SYLMMEKMFK IFVYKEGELP MFHGGPCKNI YTTEGRFIQQ MEIDTKFRTY 120 DPDKAHVYFL PFSITKMVQY LYVPDSHDCN AIKQVVVDYV TVITNKHQYW NRSLGADHFM 180 LSCHDWGPMA SSFVPDLYKN SIRVLCNANT SEGFDPSKDA SLPEINLVTG ELNNVIGGPP 240 PYDRSILAFF AGKLHGHIRL ILLEHWQNKD EDLQVYETLP KGVSYNEVMK KSKYCLCPSG 300 FEVASPRVVE AIYAECVPVL ISIDYIPPFS DVLNWDSFAV QVPVRDIPNL KKILMEIPED 360 RYLRMQKRLK HVQRHFILNT PPKRYDVFHM ILHSVWLRRL NVQISDQ* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-66 | 75 | 357 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28482.1 | 0 | 5 | 404 | 234 | 634 | unnamed protein product [Vitis vinifera] |
EMBL | CBI28483.1 | 0 | 45 | 406 | 55 | 416 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002320537.1 | 0 | 19 | 403 | 9 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524591.1 | 0 | 1 | 406 | 100 | 504 | catalytic, putative [Ricinus communis] |
RefSeq | XP_002524592.1 | 0 | 20 | 404 | 3 | 386 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW864815 | 305 | 91 | 394 | 0 |
EG631371 | 249 | 158 | 406 | 0 |
FE523338 | 300 | 47 | 343 | 0 |
GO363500 | 276 | 104 | 378 | 0 |
EC962627 | 242 | 163 | 404 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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