y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02925.1 |
Family | GT47 |
Protein Properties | Length: 693 Molecular Weight: 78083.2 Isoelectric Point: 8.4975 |
Chromosome | Chromosome/Scaffold: 3 Start: 54946494 End: 54950954 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 362 | 643 | 0 |
EMLKVYIYKEGQKPILHQPVLKGIYASEGWFMKLLEANKKFVTKNARNAHLFYLPFSSRMLEETLYVPNSHSSKNLIQFLRNYLAVIKGKHPFWNRTGGA DHFLVACHDWAPSETRRIMASCIRALCNADVKEGFVFGKDVSLPETYVRSAQKPLRNVGGKPPSQRSILAFFAGNMHGYVRPILLQHWGNKDPDMRIFGP MPHTKGNMNYIQHMRSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFETLNWESFAVFVLEKDIPNLKDILLSI |
Full Sequence |
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Protein Sequence Length: 693 Download |
MSCFPMDYKF HSMCQLETRK LLWLLGVSFA IVLFLQSVEL PHGNVLASLF SASKVPLEGD 60 IVNVEESPII SDISGNKTLS NNSDTTTASS IHERVDDNGF KERGSILDDG TVPKSNTVSN 120 ESYGVNNYTT DDEKSSMENL VEVNGTTAPP GANKSIGGRA SEEAMVPESN EKLSLNSSAM 180 YSDSSAANKK NNVGIPEHGD NSVSYKPPSP AIPPVDSSPN STSSIKEDPN LMISIPSPVF 240 DTSSNEIYSP PVHKPEDKSN QMQGDVSSLN HSSPTTTTHG RHETPQAQKS AVITIAEMND 300 LLLQSRVAYR SMKPRWSSVV DQELLKAKLQ IENAPIMSDP SLYAPLYRNV SMFKRSYELM 360 EEMLKVYIYK EGQKPILHQP VLKGIYASEG WFMKLLEANK KFVTKNARNA HLFYLPFSSR 420 MLEETLYVPN SHSSKNLIQF LRNYLAVIKG KHPFWNRTGG ADHFLVACHD WAPSETRRIM 480 ASCIRALCNA DVKEGFVFGK DVSLPETYVR SAQKPLRNVG GKPPSQRSIL AFFAGNMHGY 540 VRPILLQHWG NKDPDMRIFG PMPHTKGNMN YIQHMRSSKY CICAKGYEVN SPRVVEAIFY 600 ECVPVIISDN FVPPFFETLN WESFAVFVLE KDIPNLKDIL LSIPEKRFRQ MQMRVKKVQQ 660 HFLWHRKPVK YDIFHMILHS IWFNRVFQIN PR* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-70 | 364 | 643 | 300 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20855.1 | 0 | 6 | 692 | 1 | 604 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197954.1 | 0 | 13 | 690 | 8 | 653 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0 | 6 | 692 | 1 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 241 | 692 | 17 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 298 | 692 | 1 | 398 | predicted protein [Populus trichocarpa] |