y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010931m |
Family | CBM43 |
Protein Properties | Length: 498 Molecular Weight: 53556.8 Isoelectric Point: 5.4808 |
Chromosome | Chromosome/Scaffold: 00197 Start: 81282 End: 85035 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 442 | 9.7e-30 |
CTARDGADPKMLQAALDWACGPGKVDCSGLLQGQPCYQPDNVIAHATYAFDTYYHQMRKDPAACNFNGVAAITTSDPSHGSC | |||
GH17 | 23 | 342 | 0 |
IGANIGTELSDMPHPTQVVALLKAQQIRHVRLYDADRGMLVALANTGIKVAVSVPNEQLLGIGQSNSTAANWVSRNIVAHYPATNITTICVGSEVLTTLP NAAPVLVNALKFIHSALVASNLDHQIKVSTPLSSSLILDSFPPSQAFFNRSWNPVLVPMLNFLQSTGSSLMLNIYPYYDYMQSNGVIPLDYALFKPLPPN KEAVDSNTLVHYSNVFDAMVDAAYFAMAFLNFTNIPVMVTESGWPSKGDSNEPDATLENANTYNSNLIRHVLNQTGTPKHPGIGVSTYIYELYNEDNKPG PLSEKNWGLFDANGDPVYIL |
Full Sequence |
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Protein Sequence Length: 498 Download |
MAVHILLLLL AVSVATADED AFIGANIGTE LSDMPHPTQV VALLKAQQIR HVRLYDADRG 60 MLVALANTGI KVAVSVPNEQ LLGIGQSNST AANWVSRNIV AHYPATNITT ICVGSEVLTT 120 LPNAAPVLVN ALKFIHSALV ASNLDHQIKV STPLSSSLIL DSFPPSQAFF NRSWNPVLVP 180 MLNFLQSTGS SLMLNIYPYY DYMQSNGVIP LDYALFKPLP PNKEAVDSNT LVHYSNVFDA 240 MVDAAYFAMA FLNFTNIPVM VTESGWPSKG DSNEPDATLE NANTYNSNLI RHVLNQTGTP 300 KHPGIGVSTY IYELYNEDNK PGPLSEKNWG LFDANGDPVY ILHLTGSGSV LANDTTNQTY 360 CTARDGADPK MLQAALDWAC GPGKVDCSGL LQGQPCYQPD NVIAHATYAF DTYYHQMRKD 420 PAACNFNGVA AITTSDPSHG SCIFPGSLGK NGTMANITAP SLNSTISDSS AYKIYGSSSL 480 RSILTVIRLL VWGVVFL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-18 | 359 | 430 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-38 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-90 | 23 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 10 | 476 | 9 | 475 | beta-1,3-glucanase [Camellia sinensis] |
EMBL | CBI33479.1 | 0 | 17 | 497 | 16 | 494 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002301689.1 | 0 | 19 | 497 | 5 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305879.1 | 0 | 20 | 497 | 14 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 19 | 497 | 30 | 508 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |