y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010782m |
Family | CBM43 |
Protein Properties | Length: 502 Molecular Weight: 54731.9 Isoelectric Point: 5.4245 |
Chromosome | Chromosome/Scaffold: 00106 Start: 36136 End: 40001 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 449 | 3.7e-31 |
WCIASTKASEADLQNALDWACGPGNVDCSAIQPSQPCYEPDTLLSHASFAINSYYQQNGATDIACSFGGNGVKVDKNPSYDNC | |||
GH17 | 26 | 344 | 0 |
IGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTD NSSSLVVPAMQNVFTALKKAGLHKRIKVSSTHSLGVLSRSFPPSAGAFNSSHAHFLKPLLEFLADNQSPFMIDIYPYYAYRDSPNNVSLDYALFQSSSEV IDPNTGLLYTNMFDAQIDSIYFALMALNFRTIKIMVTETGWPSKGSPKEKAATPDNAQIYNTNLIRHVINDSGTPAKRGEELDVYIFSLFNENRKPGLES ERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 502 Download |
MARGFELFFA ISLLLALLGL CKGSTIGVCY GRNADDLPTP DKVAQLVKQH NIKYLRIYDS 60 NIQVLKAFAN TGVELMIGIP NSDLLPFAQF QSNADSWLKN SILPYYPAAK ITYITVGAEV 120 TESTDNSSSL VVPAMQNVFT ALKKAGLHKR IKVSSTHSLG VLSRSFPPSA GAFNSSHAHF 180 LKPLLEFLAD NQSPFMIDIY PYYAYRDSPN NVSLDYALFQ SSSEVIDPNT GLLYTNMFDA 240 QIDSIYFALM ALNFRTIKIM VTETGWPSKG SPKEKAATPD NAQIYNTNLI RHVINDSGTP 300 AKRGEELDVY IFSLFNENRK PGLESERNWG LFYPDQTSVY NLDFSGKGVV DMTDSNVTSL 360 NGTTTTWCIA STKASEADLQ NALDWACGPG NVDCSAIQPS QPCYEPDTLL SHASFAINSY 420 YQQNGATDIA CSFGGNGVKV DKNPSYDNCV YMTAGANKTA ATNTTAISST PSSSTRNEAI 480 AWVPSFLLMT LLPTLLTLKN L* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-10 | 24 | 335 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-20 | 366 | 438 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-37 | 366 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-117 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 465 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 465 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 495 | 1 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 1 | 455 | 1 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 485 | 1 | 487 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |