y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010394m |
Family | CBM43 |
Protein Properties | Length: 512 Molecular Weight: 55788.8 Isoelectric Point: 5.9513 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1874045 End: 1877357 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 450 | 4.2e-34 |
CIAMDGVDTKTLQAALDWACGPGRANCSDIQPGEPCYQPNNVKSHASYAFDSYYHEQGKTSGSCDFKGVAMITTTDPSHGSC | |||
GH17 | 31 | 350 | 0 |
VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVP SSAPILLPAIESLYSALVAANLHTQIKISTPHAASIILDPFPPSQAFFNQSLSSVMLPLLQFLSKTGAPLMMNLYPYYVFMQNKGVVPLDNSLFKPLTPS KEMVDPNTLLHYTNVLDAMIDAAYFSMKNLNITDVMVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHILDRSGTPFHPEVTSNVYIYELFNEDLRSP PISEANWGLFHANTTPVYLL |
Full Sequence |
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Protein Sequence Length: 512 Download |
MENPKLTLFI IFYFTVLNTA KAADPDKEPF VGVNIGTDVS NLLSPTDLVS FLQVQKITHI 60 RLYDADPDLL KALAKTKIRV IVSVPNNQLL AIGSSNTTAA SWIGKNVIAY YPETLITAIA 120 VGDEVLTTVP SSAPILLPAI ESLYSALVAA NLHTQIKIST PHAASIILDP FPPSQAFFNQ 180 SLSSVMLPLL QFLSKTGAPL MMNLYPYYVF MQNKGVVPLD NSLFKPLTPS KEMVDPNTLL 240 HYTNVLDAMI DAAYFSMKNL NITDVMVLVT ESGWPSKGDS KEPYATIDNA DTYNSNLIKH 300 ILDRSGTPFH PEVTSNVYIY ELFNEDLRSP PISEANWGLF HANTTPVYLL HVSGSGTFLA 360 NDTTNQTYCI AMDGVDTKTL QAALDWACGP GRANCSDIQP GEPCYQPNNV KSHASYAFDS 420 YYHEQGKTSG SCDFKGVAMI TTTDPSHGSC IFPGSKKVSN KTKAVVNSTQ ISGAADRLRF 480 ISLRGNQISA NAVAFSILLF IPFMTPWWGV Q* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 263 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-25 | 367 | 439 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-44 | 367 | 452 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-85 | 31 | 348 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 21 | 446 | 34 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 1 | 494 | 11 | 509 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 43 | 504 | 1 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 43 | 504 | 1 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 28 | 504 | 47 | 531 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 350 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 31 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 31 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 31 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 31 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |