y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g009301m |
Family | CBM43 |
Protein Properties | Length: 539 Molecular Weight: 59063.2 Isoelectric Point: 8.4203 |
Chromosome | Chromosome/Scaffold: 08273 Start: 19 End: 1918 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 452 | 532 | 4.5e-33 |
WCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPSTC | |||
GH17 | 93 | 412 | 0 |
IGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPH NTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALSALQNSYPSSAGSFRPELIEPVFKPMLNFLRQTGSFLMVNAYPFFAYESNTDVISLDYALFRENPG VVDAGNGLRYFSLFDAQIDAVFAALSALKYDDIRMVVTETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPT SERNYGLFYPNEEKVYNIPF |
Full Sequence |
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Protein Sequence Length: 539 Download |
MLLSRTTTSL SSLLFLYPKS LLSLKLTPCF LLHTFFSWLA HKTRTLTPPN PLSLFPSLPF 60 MLCFTKNQSM DCLFAFYFFL LLSSFIFADA GSIGVNYGRI ANNLPSASKV VQLLKSQGIE 120 RVKVFDTDAA VLKALSGSGI KVTVDLPNEL LFSAAKRPSF AFSWVQKNVA AYHPDTQIEA 180 IGVGNEVFVD PHNTTKFLLP AMKNVHEALV KYNLHSSIKV SSPIALSALQ NSYPSSAGSF 240 RPELIEPVFK PMLNFLRQTG SFLMVNAYPF FAYESNTDVI SLDYALFREN PGVVDAGNGL 300 RYFSLFDAQI DAVFAALSAL KYDDIRMVVT ETGWPSKGDE NENGASVENA AAYNGNLVRR 360 ILTGGGTPLR PKADLTVYLF ALFNEDQKPG PTSERNYGLF YPNEEKVYNI PFTVEGLKNY 420 HDHRSPVNRS PTVRAPVNGG GGVSKSTSGN TWCVANAEVG KEKLQRGLDY ACGEGGADCR 480 PIQRGATCYN PNTLEAHASF AFNSYYQKQS RAGGSCYFGG AAYVVTQPPS TCSVFYQY* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 265 | 403 | 149 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-24 | 451 | 523 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-38 | 451 | 533 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-109 | 93 | 412 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD26909.1 | 0 | 89 | 536 | 21 | 468 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | XP_002274828.1 | 0 | 78 | 529 | 9 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 70 | 529 | 1 | 459 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 87 | 529 | 18 | 459 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 88 | 538 | 19 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 93 | 412 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 93 | 412 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 93 | 412 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 93 | 413 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 93 | 413 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |