y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G011900.1 |
Family | CBM43 |
Protein Properties | Length: 403 Molecular Weight: 44347 Isoelectric Point: 7.3829 |
Chromosome | Chromosome/Scaffold: 02 Start: 1334342 End: 1336247 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 171 | 1.8e-22 |
SIEFLNLCETTEDILQASSQADELPLAVSVSAEALNEVSFSILLAERWLRHNVLAHYPASNITTIVVGTTAFCQQGQQHNHLSKVLSSLKNVYHSLKRWG LEKDIKVSFAFTLDCLSSNKIYHNNDLKMVKPLLEFLQEVNSTYSV | |||
CBM43 | 315 | 397 | 2.4e-33 |
WCVAKPSVPEETLQPAMDYACGEGGADCMEITPQGNCYYPDTVIAHASYAFNSYWQKHKRNGGTCSFGGTAMLINADPSFLHC |
Full Sequence |
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Protein Sequence Length: 403 Download |
MLKKMGWLFP LFFLCFLGLT VTGQESIEFL NLCETTEDIL QASSQADELP LAVSVSAEAL 60 NEVSFSILLA ERWLRHNVLA HYPASNITTI VVGTTAFCQQ GQQHNHLSKV LSSLKNVYHS 120 LKRWGLEKDI KVSFAFTLDC LSSNKIYHNN DLKMVKPLLE FLQEVNSTYS VIPHHDFSHF 180 SHKSLSLVSS HFESLKKLGF FYLSNINVMA IVTKGRKNTA RKLSVVDFSP IGPFPVRPAP 240 TPEVAKSPRT PSNVPLPPLA QVVSSPPPIL SPAFAPEEPP FGVPASSPHG FTLPPCDPLH 300 NGSPYPQIFP VQKVWCVAKP SVPEETLQPA MDYACGEGGA DCMEITPQGN CYYPDTVIAH 360 ASYAFNSYWQ KHKRNGGTCS FGGTAMLINA DPSFLHCRFV LS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PHA02682 | PHA02682 | 0.001 | 229 | 323 | 103 | + ORF080 virion core protein; Provisional | ||
PHA03247 | PHA03247 | 0.001 | 230 | 288 | 59 | + large tegument protein UL36; Provisional | ||
pfam00332 | Glyco_hydro_17 | 0.0003 | 70 | 167 | 103 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 2.0e-26 | 315 | 386 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-41 | 315 | 399 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22745.1 | 0 | 195 | 402 | 1 | 206 | unknown [Glycine max] |
EMBL | CBI33700.1 | 0 | 2 | 402 | 1 | 357 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 8 | 402 | 5 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 4 | 402 | 3 | 413 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 20 | 398 | 20 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 315 | 399 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.0009 | 70 | 162 | 69 | 162 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |