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Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g085720.1 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 53299.3 Isoelectric Point: 5.3744 |
Chromosome | Chromosome/Scaffold: 8 Start: 23487689 End: 23493558 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 446 | 7.5e-33 |
CVAKDGADTDKLQNGLSWACGQGGANCAPIQQGQRCYLPNNVKSHASYAYNDYYQKNQGVGGTCDFDGTAEITSKDPSYGSC | |||
GH17 | 26 | 346 | 0 |
VGVNIGTDVSDMPSASNVVAILKANQITHVRLYDANAHLLQALSKTNIDVMVGVTNEEVLRIGESPSAAAAWINKNVVAYVPSTNITAIAVGSEVLSTIP NVAPVLVPAMNSLHKALVAANLNFRVKVSTPQSMDIIPKPFPPSTATFNSSWNSTIYQVLQFLRNTNSSFMLNAYPYYGYTKGDGIFPLEYALFRPLPSV KQIVDPNTLYHYNSMFDAMVDATYYSIDALNFKDIPVVVTETGWPSFGGANEPDATAENAETYNNNMIQRVLNDSGPPSQPNIPINTYIYELFNEDKRNG PVSEKNWGIVYTNGSAVYPLS |
Full Sequence |
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Protein Sequence Length: 499 Download |
MKLKKWLASV LLLTAAMLTT TLGAFVGVNI GTDVSDMPSA SNVVAILKAN QITHVRLYDA 60 NAHLLQALSK TNIDVMVGVT NEEVLRIGES PSAAAAWINK NVVAYVPSTN ITAIAVGSEV 120 LSTIPNVAPV LVPAMNSLHK ALVAANLNFR VKVSTPQSMD IIPKPFPPST ATFNSSWNST 180 IYQVLQFLRN TNSSFMLNAY PYYGYTKGDG IFPLEYALFR PLPSVKQIVD PNTLYHYNSM 240 FDAMVDATYY SIDALNFKDI PVVVTETGWP SFGGANEPDA TAENAETYNN NMIQRVLNDS 300 GPPSQPNIPI NTYIYELFNE DKRNGPVSEK NWGIVYTNGS AVYPLSYGGA SGQITGSGNS 360 TGIFCVAKDG ADTDKLQNGL SWACGQGGAN CAPIQQGQRC YLPNNVKSHA SYAYNDYYQK 420 NQGVGGTCDF DGTAEITSKD PSYGSCRFPG SSGAGGVSLP PTALGPSSSP FGASMNLQVS 480 TLQYMISAIG VFFALMIL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-21 | 365 | 434 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-40 | 364 | 448 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-76 | 26 | 347 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 1 | 442 | 1 | 440 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 27 | 451 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 479 | 1 | 478 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 27 | 448 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 37 | 498 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 26 | 347 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 26 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 26 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 26 | 347 | 3 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |