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Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g065460.1 |
Family | CBM43 |
Protein Properties | Length: 505 Molecular Weight: 54646.5 Isoelectric Point: 5.1789 |
Chromosome | Chromosome/Scaffold: 3 Start: 20929458 End: 20933251 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 440 | 3e-28 |
CVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGKPCYDPDNVVAHANYAFDAYYHKMGKSTESCNFNDMATISTSDPSK | |||
GH17 | 24 | 344 | 0 |
IGVNIGTDLSDMPHPTQVVALLKAQQIRHIRLYNADQAMLTALSKSGIQVVISVPNEELLAIGQSNSTASNWVSRNVLAYYPATNITAICVGSEVLTTLP NVAKVLVNALNYIHSALVASNLDRQIKVSTPLPSTMILDSFPPSQAFFNTSMNQVLKPMLDFLQSTQSYLMLNVYPYHDYMESNGVIPLDYALFKPIPPN KESIDSNTLLHYSNVFDAVVDAAYFAMSYMNYTNIPVVVTETGWPSKGDSNEPGATLANANTYNSNLIKHVLNKTGTPKLPGIGVSTYIYELYNEDKQPG ALSEKNWGLFDSNGVPVYVLQ |
Full Sequence |
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Protein Sequence Length: 505 Download |
MVMHFLLVLL FAVSTVVADE EPFIGVNIGT DLSDMPHPTQ VVALLKAQQI RHIRLYNADQ 60 AMLTALSKSG IQVVISVPNE ELLAIGQSNS TASNWVSRNV LAYYPATNIT AICVGSEVLT 120 TLPNVAKVLV NALNYIHSAL VASNLDRQIK VSTPLPSTMI LDSFPPSQAF FNTSMNQVLK 180 PMLDFLQSTQ SYLMLNVYPY HDYMESNGVI PLDYALFKPI PPNKESIDSN TLLHYSNVFD 240 AVVDAAYFAM SYMNYTNIPV VVTETGWPSK GDSNEPGATL ANANTYNSNL IKHVLNKTGT 300 PKLPGIGVST YIYELYNEDK QPGALSEKNW GLFDSNGVPV YVLQLTGSGA VLANDTKGET 360 YCVAKDGADP KMLQAGIDWA CGPGKVDCSP LLQGKPCYDP DNVVAHANYA FDAYYHKMGK 420 STESCNFNDM ATISTSDPSK SPFPLIGQNF TSHGSCIFPG SLGFSNAPAP APSHFSGCTL 480 LRCELRIRSL LIVIGLLISE VVLL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 256 | 336 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-19 | 360 | 432 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-35 | 360 | 458 | 99 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-83 | 24 | 341 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 11 | 478 | 9 | 468 | beta-1,3-glucanase [Camellia sinensis] |
GenBank | ABN08070.1 | 0 | 1 | 504 | 1 | 497 | Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] |
EMBL | CBI33479.1 | 0 | 16 | 471 | 14 | 460 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265396.1 | 0 | 16 | 471 | 14 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002531922.1 | 0 | 20 | 504 | 30 | 508 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 24 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |