y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000630545 |
Family | CBM43 |
Protein Properties | Length: 471 Molecular Weight: 51401.5 Isoelectric Point: 5.4414 |
Chromosome | Chromosome/Scaffold: 011209234 Start: 14599 End: 16745 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 451 | 3.9e-29 |
WCIASSKASELDLQNALDWACGPGNVDCRAIQPSQPCFEPDNTVAHASFAFNTYYQQNGATDIACSFGGTGIKVDKNPSTC | |||
GH17 | 27 | 345 | 0 |
IGICYGRNADDLPTPDKAAQLVQLHNIKYVRIYDSNIQVLKAFANTGVELMVGVPNSDLLAFSQFQSNADTWLKNSILPYYPATKITYITVGAEVTESSS NFSAQVVPAMRNVLTALKKVGLSKKIKLSSTHSLGVLSRSFPPSAGAFNSSHASFLKPLLEYLAENQSPFMVDIYPYYAYRDSPSNGTLDYALFEASSEV IDPNTGLLYTNMLDAQIDAIYYALMALNFKTIKVMVTETGWPXKGSPKETAATPDNAQTYNTNLIRHVINDTGTPAKPGERLDVYIFSLFNENRKPGLES ERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 471 Download |
MGRGFFRLLF ATSLLLILLD VCWGSTIGIC YGRNADDLPT PDKAAQLVQL HNIKYVRIYD 60 SNIQVLKAFA NTGVELMVGV PNSDLLAFSQ FQSNADTWLK NSILPYYPAT KITYITVGAE 120 VTESSSNFSA QVVPAMRNVL TALKKVGLSK KIKLSSTHSL GVLSRSFPPS AGAFNSSHAS 180 FLKPLLEYLA ENQSPFMVDI YPYYAYRDSP SNGTLDYALF EASSEVIDPN TGLLYTNMLD 240 AQIDAIYYAL MALNFKTIKV MVTETGWPXK GSPKETAATP DNAQTYNTNL IRHVINDTGT 300 PAKPGERLDV YIFSLFNENR KPGLESERNW GLFYPDQTSV YNLDFTGKGS VDMTTGTNVT 360 SSNGTTTTTT WCIASSKASE LDLQNALDWA CGPGNVDCRA IQPSQPCFEP DNTVAHASFA 420 FNTYYQQNGA TDIACSFGGT GIKVDKNPST CSRIQTLLLN RISXTGLAEN * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-8 | 25 | 336 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-20 | 371 | 442 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-34 | 371 | 452 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-109 | 27 | 345 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 449 | 1 | 448 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 449 | 1 | 448 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 449 | 1 | 443 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 1 | 449 | 1 | 445 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 6 | 449 | 5 | 445 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 27 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 27 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 27 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 27 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |