y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000321326 |
Family | CBM43 |
Protein Properties | Length: 644 Molecular Weight: 71207.8 Isoelectric Point: 8.8191 |
Chromosome | Chromosome/Scaffold: 010613346 Start: 10839 End: 18834 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 481 | 540 | 3.3e-25 |
WCVANGEAGKEKLQAGIDYACGEGGADCHQIQPGSACYDPNTLEAHASYAFNSYYQKKAR | |||
GH17 | 121 | 441 | 0 |
VGVNYGRIADNLPSAYKVVQLLKSQGLERVKVFDSDPAVLRALSGSDIKVTVDLPNELLSAAAKSQSYATNWVQRNVVAYHPNTQIEAIGVGNEVFVDTH DTTKFLISAMKNIHAALVHFKLESSIKVSSPIALSALQNSYPSSAGSFRPELVEPVFKPMLEFLRQTGSYLMVNCYPYFAYESNSDVIPLDYALFHQNPG VVDAGNGLRYFNLFDAQIDAVFAAMSALKYDDINMVVSETGWPSKGDSVEVGASVENAAAYNGNLVRRILTGGGTPLRPKSRIDRLSLRALQRGQENSGP PSERNYGLFFPNERKVYDIPF |
Full Sequence |
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Protein Sequence Length: 644 Download |
MNEDKNKRGE NPPPNSVKLK TVEFVGQWSL ASNAWVPPXR SARYSANTIK STRSPRSAHC 60 HSQPPPQKIR RDQQKRKEEE EEALPPFTML CFSKNQSMER HVIAVVLLLS VFSSLADAGS 120 VGVNYGRIAD NLPSAYKVVQ LLKSQGLERV KVFDSDPAVL RALSGSDIKV TVDLPNELLS 180 AAAKSQSYAT NWVQRNVVAY HPNTQIEAIG VGNEVFVDTH DTTKFLISAM KNIHAALVHF 240 KLESSIKVSS PIALSALQNS YPSSAGSFRP ELVEPVFKPM LEFLRQTGSY LMVNCYPYFA 300 YESNSDVIPL DYALFHQNPG VVDAGNGLRY FNLFDAQIDA VFAAMSALKY DDINMVVSET 360 GWPSKGDSVE VGASVENAAA YNGNLVRRIL TGGGTPLRPK SRIDRLSLRA LQRGQENSGP 420 PSERNYGLFF PNERKVYDIP FTVEGLKNYH DSRSPVSGNQ QVTAPVNGGG DLSKSLTGNT 480 WCVANGEAGK EKLQAGIDYA CGEGGADCHQ IQPGSACYDP NTLEAHASYA FNSYYQKKAR 540 GVGHIILVLD VSXLFLQDVQ CDDTSXHLDK LRDKKDKYKQ LVRDKEFGYT FKPRTIIEDP 600 TDVSTPKSSN GTMRVFQRVC KLVVSTVYAR PFKCTSLHLK RKKE 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-17 | 480 | 543 | 69 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-28 | 480 | 540 | 61 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-95 | 121 | 441 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD26909.1 | 0 | 117 | 543 | 21 | 446 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | XP_002274828.1 | 0 | 98 | 543 | 1 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 98 | 543 | 1 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 114 | 543 | 17 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 116 | 543 | 19 | 443 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 121 | 441 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 121 | 442 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 121 | 442 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 121 | 442 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 121 | 442 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY267569 | 346 | 94 | 439 | 0 |
EX675683 | 306 | 196 | 497 | 0 |
DY269969 | 316 | 116 | 431 | 0 |
DT566268 | 303 | 242 | 543 | 0 |
FC891961 | 307 | 94 | 400 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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