y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000232219 |
Family | CBM43 |
Protein Properties | Length: 575 Molecular Weight: 64265.8 Isoelectric Point: 7.1313 |
Chromosome | Chromosome/Scaffold: 011209236 Start: 12768 End: 16470 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 447 | 529 | 1.6e-30 |
WCIASSKASELDLQNALDWACGPGNVDCRAIQPSQPCFEPDNTVSHASYAFNNYYQQNGATEIACSFGGTGIKVDKNPSYDNC | |||
GH17 | 105 | 423 | 0 |
IGICYGRNADDLPTPDKAAQLVQLHNIKYVRIYDSNIQVLKAFANTGVELMIGVPNSDLLAFSQFQSNVDTWLKNSILPYYPATKITYITVGAEVTESSS NISAQVMPAMRNVLTALKKVGLSKKIKLSSTHSLGVLSRSFPPSAGAFNSSHASFLKPLLEFLAENQSPFMVDIYPYYAYRDSPSNVTLDYALFDASSEV IDPNTGLVYTNMLDAQIDAIYYALMALNFKTIKVMITETGWPSKGSPKETAATPDNAQTYNTNLIRHVINXTGTPAKPGERLDVYIFSLFNENRKPGLES ERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 575 Download |
MREERIRIET EQKGLRTKEQ LLFTRRKEKN FEEIGWSSER KEKSRSRSCL REEGKRANGK 60 WVLPAYHCHF TAAYTLGYIK LKERCLGDXX KVRLSIDYVC RGSTIGICYG RNADDLPTPD 120 KAAQLVQLHN IKYVRIYDSN IQVLKAFANT GVELMIGVPN SDLLAFSQFQ SNVDTWLKNS 180 ILPYYPATKI TYITVGAEVT ESSSNISAQV MPAMRNVLTA LKKVGLSKKI KLSSTHSLGV 240 LSRSFPPSAG AFNSSHASFL KPLLEFLAEN QSPFMVDIYP YYAYRDSPSN VTLDYALFDA 300 SSEVIDPNTG LVYTNMLDAQ IDAIYYALMA LNFKTIKVMI TETGWPSKGS PKETAATPDN 360 AQTYNTNLIR HVINXTGTPA KPGERLDVYI FSLFNENRKP GLESERNWGL FYPDQTSVYN 420 LDFTGKSSVD MITETNVTSS NGTTPTWCIA SSKASELDLQ NALDWACGPG NVDCRAIQPS 480 QPCFEPDNTV SHASYAFNNY YQQNGATEIA CSFGGTGIKV DKNPSYDNCI YMTTGERRWF 540 ESFCPIFKGK NVIAEHQTAP QVLYDSASSS EDAIP 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 103 | 414 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-20 | 446 | 518 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 446 | 531 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-112 | 105 | 423 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 92 | 542 | 14 | 465 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 92 | 542 | 14 | 465 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 100 | 538 | 21 | 456 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 100 | 535 | 22 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 94 | 538 | 15 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 105 | 423 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 105 | 424 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 105 | 424 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 105 | 424 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 105 | 424 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR946401 | 293 | 208 | 500 | 0 |
DT738192 | 286 | 199 | 484 | 0 |
EX264975 | 282 | 100 | 381 | 0 |
EE078272 | 267 | 219 | 485 | 0 |
ES802617 | 335 | 94 | 426 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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