y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000120761 |
Family | CBM43 |
Protein Properties | Length: 627 Molecular Weight: 69241.8 Isoelectric Point: 6.6233 |
Chromosome | Chromosome/Scaffold: 003106196 Start: 1209 End: 5802 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 441 | 9.7e-29 |
CTAKANADPDKLQDGINWACGQGGANCTPIQRGQRCYLPDTIVNHASYAYNDYYQKMKSAGGTCDFDDTAIISTVDPTHA | |||
GH17 | 26 | 346 | 0 |
IGINIGTDVSDLPSETDTVALLKAHQITHVRLYNADAHILKALSNSGIEVMVGITNEEVLSVGESSSAAAAWINKNVAAYLPSTNITAIAVGSEVITSIP HAAPVLVDAMNYLHKALVASNLNFQVKVSTPQSMDIIPKPFPPSTATFNYSWGHTIYQILQFIKNTNSYYMLNAYPYYGYTNGDGIFPLDYALFRPLPSV KQIVDPNTVFHYNSMFDAMVDATYYSIEDFNFSGISVVVTETGWPWFGGSKEPDANTGNAQTYTNNLIRRVLNDSGPPSQPKLPINTYIYELFNEDKRPG PVSEKNWGVLYTNGSAVYPLS |
Full Sequence |
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Protein Sequence Length: 627 Download |
MMREKWIGGV LLLLVGMFTD VQGAFIGINI GTDVSDLPSE TDTVALLKAH QITHVRLYNA 60 DAHILKALSN SGIEVMVGIT NEEVLSVGES SSAAAAWINK NVAAYLPSTN ITAIAVGSEV 120 ITSIPHAAPV LVDAMNYLHK ALVASNLNFQ VKVSTPQSMD IIPKPFPPST ATFNYSWGHT 180 IYQILQFIKN TNSYYMLNAY PYYGYTNGDG IFPLDYALFR PLPSVKQIVD PNTVFHYNSM 240 FDAMVDATYY SIEDFNFSGI SVVVTETGWP WFGGSKEPDA NTGNAQTYTN NLIRRVLNDS 300 GPPSQPKLPI NTYIYELFNE DKRPGPVSEK NWGVLYTNGS AVYPLSLSDS SQITGNSSGV 360 FCTAKANADP DKLQDGINWA CGQGGANCTP IQRGQRCYLP DTIVNHASYA YNDYYQKMKS 420 AGGTCDFDDT AIISTVDPTH ASYIGFPVKQ NNSLVARRTF PRKAMARVNF PEVLIQANLR 480 DLHQRQLHLQ PLLEAGVRIY KFPIFNISFR QHFSHCYCFD LRLFPPLPST NQSGAAEAWW 540 AHNPQTSAKV ILSVLGFERA RQASLFVFQL IILIMDLELI EFYFDCGKGV SIGMSGVMGR 600 QVVGNSTSSL MAFSLLGSSL TMMAFRW 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 258 | 338 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-18 | 362 | 432 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-34 | 361 | 442 | 82 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-76 | 26 | 346 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 1 | 448 | 1 | 447 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 27 | 444 | 27 | 444 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 440 | 1 | 441 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 27 | 444 | 27 | 444 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 37 | 476 | 1 | 448 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 343 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 343 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 5.60519e-45 | 26 | 348 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 5.60519e-45 | 26 | 348 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |