y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_90526g0010 |
Family | CBM43 |
Protein Properties | Length: 470 Molecular Weight: 49624.8 Isoelectric Point: 5.6627 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 383 | 465 | 5.9e-32 |
WCVAKTGENNMSALQEALNYACGAGADCSAIQAGNACYQPNTVEAHASYAFNSYWQSTKSSGGTCNFNGVASLTTSDPSFQGC | |||
GH17 | 38 | 336 | 0 |
VGINYGQVANNLPSPAIAVQLMKSINVGYVKIYDAAPQVLTALANTSLPLVITVANQDIPSIASGSSNADQWVQKNVLPYYPATQIFMIMVGNEVLSDTQ IQSTWSQLVPAMENLQSSLVKNNLDGSIKVTTSVIWTAPSSFLNRTDSYFFLDVYPYFAWSSNPVNISLNYALFGLRTAAIQDGQLHYSNMLDAQLDSVV AAMAELGFPQVKLAISETGWPSKGGADQPGANLANAVKYNRGLVARFSASPPVGTPRRPGAFIPAFLFSLFNEDQKPGAVTERNWGVFYAGGTPVYNID |
Full Sequence |
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Protein Sequence Length: 470 Download |
MGSSNRSMFR SMLISASLCF AFGALGIVSA DFANTHAVGI NYGQVANNLP SPAIAVQLMK 60 SINVGYVKIY DAAPQVLTAL ANTSLPLVIT VANQDIPSIA SGSSNADQWV QKNVLPYYPA 120 TQIFMIMVGN EVLSDTQIQS TWSQLVPAME NLQSSLVKNN LDGSIKVTTS VIWTAPSSFL 180 NRTDSYFFLD VYPYFAWSSN PVNISLNYAL FGLRTAAIQD GQLHYSNMLD AQLDSVVAAM 240 AELGFPQVKL AISETGWPSK GGADQPGANL ANAVKYNRGL VARFSASPPV GTPRRPGAFI 300 PAFLFSLFNE DQKPGAVTER NWGVFYAGGT PVYNIDLSGG NQGPNYAPII RSGTINNTSS 360 APAGAPAPAA TATASPPSAL QQWCVAKTGE NNMSALQEAL NYACGAGADC SAIQAGNACY 420 QPNTVEAHAS YAFNSYWQST KSSGGTCNFN GVASLTTSDP SFQGCSFPLH 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0009 | 101 | 327 | 234 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-21 | 382 | 454 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 382 | 467 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-91 | 38 | 336 | 321 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16205.1 | 0 | 35 | 467 | 45 | 491 | unknown [Picea sitchensis] |
EMBL | CBI39470.1 | 0 | 38 | 468 | 29 | 463 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001777261.1 | 0 | 36 | 468 | 4 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001780045.1 | 0 | 36 | 469 | 4 | 452 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002462618.1 | 0 | 38 | 468 | 37 | 477 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 38 | 337 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 38 | 337 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 38 | 337 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 38 | 337 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 38 | 337 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |