y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_8603g0010 |
Family | CBM43 |
Protein Properties | Length: 541 Molecular Weight: 57733.2 Isoelectric Point: 6.9178 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 396 | 478 | 2.4e-33 |
WCVAKPGIPDSNLQVALDYACGLGGADCTAIQQSGMCYNPDTVAFHASYAFDSYYKKSGMGPGTCDFAGNAVVTTQDPSTGTC | |||
GH17 | 31 | 248 | 2.9e-36 |
IGVSYDSKDSTLPSPKKLVELLMKHDLLHVRLLDANPIVLEALSGTGIEVAVGMGYKQAKDIGKSKSRAALWLKKKVMGFMPDTLITSIIVNHQGMSEEV VSTLVPAMKAIYSALVDANLDKRIKVTTTLSASLIKDASSVPPSSSTKDLRWVLHPLLAFLSKTGSFLILNADFDRDFAHREEDLINSVVVAASNAMAFL HYPDIPIVINDQGLPSEA |
Full Sequence |
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Protein Sequence Length: 541 Download |
MGTQHLIAQR VQQLLGFILI LCAVICSGTS IGVSYDSKDS TLPSPKKLVE LLMKHDLLHV 60 RLLDANPIVL EALSGTGIEV AVGMGYKQAK DIGKSKSRAA LWLKKKVMGF MPDTLITSII 120 VNHQGMSEEV VSTLVPAMKA IYSALVDANL DKRIKVTTTL SASLIKDASS VPPSSSTKDL 180 RWVLHPLLAF LSKTGSFLIL NADFDRDFAH REEDLINSVV VAASNAMAFL HYPDIPIVIN 240 DQGLPSEAMR TFSMTKNLRD QVLAQSMNSA QIWTIIVKMS SLDISMRKEL SREGEVLLRS 300 NSRELLDNKA NSTSNRTSEL GSQLDTFPTT PITTTPTAPI TTTPTTPVTL TPPPTTFTPT 360 TPTTPITTPT TPTVTPYTPP TTPTTTTPTT SSSQSWCVAK PGIPDSNLQV ALDYACGLGG 420 ADCTAIQQSG MCYNPDTVAF HASYAFDSYY KKSGMGPGTC DFAGNAVVTT QDPSTGTCTF 480 PSSTSSSSLL NTSIPTSGGF GSTGIPPASG SNDDATSIFF CVPIFFALFS LVVSMMVGKR 540 L 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-24 | 395 | 467 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-28 | 31 | 203 | 175 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 3.0e-35 | 395 | 472 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24695.1 | 0 | 14 | 480 | 11 | 482 | unknown [Picea sitchensis] |
GenBank | ACN39797.1 | 0 | 34 | 482 | 30 | 472 | unknown [Picea sitchensis] |
RefSeq | NP_178637.2 | 0 | 30 | 483 | 24 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002276666.1 | 0 | 23 | 478 | 19 | 516 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 27 | 523 | 22 | 580 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-21 | 385 | 485 | 2 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 3e-17 | 31 | 201 | 1 | 172 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 6e-16 | 30 | 201 | 1 | 176 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 6e-16 | 30 | 201 | 1 | 176 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 6e-16 | 30 | 201 | 1 | 176 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |