y
Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_17470g0010 |
Family | CBM43 |
Protein Properties | Length: 485 Molecular Weight: 51887.6 Isoelectric Point: 4.3504 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 395 | 480 | 1.6e-32 |
WCVVSPVAVAQVDETSLQAALDYACGAGADCSLIEPGEPCYLPNTLVSHASYAFNSYWQKTKAAGATCDFHGAAVLTSSDPSVGDC | |||
GH17 | 39 | 361 | 0 |
LGINYGRVADNLPSPSSAVALIKNLQAGYVKIYDADPQVLSALSNTALQVTITVRNQDISNISSSPTVAEQWVQANVLPHYPSTLITAIMVGNEVLSDYQ NQATWLLMLPAMANIHASLLNHGLADSIKVTTSLAMDVLSSSYPPSEGTFRNDIASPVLQPLLDFVNRTGSFVFLDIYPFFAWSANPANVTLDYATFSLD RTAAEFDDAGLSYSNMLDAQLDAVLAAMERLGFPGVNVVVGETGWPTKGDENQPGTNVPNATRYNQQLVQKVLADPPRGTPRRPGAFIPTFIFSLFNEDQ KPGPNTERNWGLFYPDGTPVYPI |
Full Sequence |
---|
Protein Sequence Length: 485 Download |
MQRTVPLLFA LLVAAFGHLV ILSAAADSGV FPPFYTRALG INYGRVADNL PSPSSAVALI 60 KNLQAGYVKI YDADPQVLSA LSNTALQVTI TVRNQDISNI SSSPTVAEQW VQANVLPHYP 120 STLITAIMVG NEVLSDYQNQ ATWLLMLPAM ANIHASLLNH GLADSIKVTT SLAMDVLSSS 180 YPPSEGTFRN DIASPVLQPL LDFVNRTGSF VFLDIYPFFA WSANPANVTL DYATFSLDRT 240 AAEFDDAGLS YSNMLDAQLD AVLAAMERLG FPGVNVVVGE TGWPTKGDEN QPGTNVPNAT 300 RYNQQLVQKV LADPPRGTPR RPGAFIPTFI FSLFNEDQKP GPNTERNWGL FYPDGTPVYP 360 IVLSNDAPAL SHISVPSQNN GPLPASPPSP VSVQWCVVSP VAVAQVDETS LQAALDYACG 420 AGADCSLIEP GEPCYLPNTL VSHASYAFNS YWQKTKAAGA TCDFHGAAVL TSSDPSVGDC 480 VFDHM 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-5 | 184 | 354 | 184 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-22 | 394 | 469 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-39 | 394 | 482 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-109 | 39 | 361 | 323 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16205.1 | 0 | 1 | 485 | 10 | 494 | unknown [Picea sitchensis] |
EMBL | CBI39470.1 | 0 | 38 | 482 | 28 | 462 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001780045.1 | 0 | 37 | 482 | 4 | 450 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784285.1 | 0 | 39 | 484 | 1 | 437 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002334812.1 | 0 | 13 | 482 | 1 | 460 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 39 | 361 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 39 | 361 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 39 | 361 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 39 | 364 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 39 | 364 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |