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Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10429783g0010 |
Family | CBM43 |
Protein Properties | Length: 457 Molecular Weight: 49686.1 Isoelectric Point: 4.7764 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 319 | 400 | 1.1e-28 |
CISMDGADPKLLQAALDWACGPGKVDCTALLQGQSCYDPDNVQQHASYAFDSYYHETGMAAGACDCNGVATITTTDPSHDSC | |||
GH17 | 165 | 300 | 0 |
GVMGLDYALFRPLPPNKEAVDANTLLHYTNVFDAMIDAAYFSMADLNFTNIPVVVSETGWPSKGDQSEPVATVDNADTYNSNLVRHVLNNTGTPKHPGIP VNTYIYELFNEDLRIGPTSEQNWGLFNADKSPVYTL |
Full Sequence |
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Protein Sequence Length: 457 Download |
MGQFRPLSLL FWSSYLERDI TKYVEKILMR FGFTSFNVNT INRFDTAEQK GKASCTVVIT 60 IGNDCFLKAV SSWRKHSKLV QECKAVLEKL SATLPPAEQE EQRTESGNMK LNMFSSKTYI 120 PDTNIMGICV GSEVLTTVPN AALVLVSAMK FLHSALVAAN LDGNGVMGLD YALFRPLPPN 180 KEAVDANTLL HYTNVFDAMI DAAYFSMADL NFTNIPVVVS ETGWPSKGDQ SEPVATVDNA 240 DTYNSNLVRH VLNNTGTPKH PGIPVNTYIY ELFNEDLRIG PTSEQNWGLF NADKSPVYTL 300 HLTGAGIVLA NDTTNQNYCI SMDGADPKLL QAALDWACGP GKVDCTALLQ GQSCYDPDNV 360 QQHASYAFDS YYHETGMAAG ACDCNGVATI TTTDPSHDSC IYPGSIGSNG TLANITNNTV 420 LGAPVNSTTS SSPVHLDFSR AGPIFIALLL WNALFFQ 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03076 | PLN03076 | 6.0e-6 | 71 | 97 | 27 | + ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | ||
COG5309 | COG5309 | 4.0e-8 | 213 | 294 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-17 | 318 | 389 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-36 | 318 | 402 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-38 | 162 | 300 | 139 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 75 | 435 | 49 | 471 | beta-1,3-glucanase [Camellia sinensis] |
RefSeq | XP_002312452.1 | 0 | 119 | 456 | 83 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 75 | 430 | 45 | 464 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 75 | 417 | 50 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 96 | 435 | 88 | 484 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 7e-28 | 159 | 302 | 182 | 314 | A Chain A, Crystal Structure Of A Putative Cell Adhesion Protein (bdi_3519) From Parabacteroides Distasonis Atcc 8503 At 2.34 A Resolution (psi Community Target, Nakayama) |
PDB | 3ur8_A | 7e-28 | 159 | 302 | 182 | 314 | A Chain A, Crystal Structure Of A Putative Cell Adhesion Protein (bdi_3519) From Parabacteroides Distasonis Atcc 8503 At 2.34 A Resolution (psi Community Target, Nakayama) |
PDB | 3ur7_B | 7e-28 | 159 | 302 | 182 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 7e-28 | 159 | 302 | 182 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 5e-27 | 159 | 302 | 182 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR571559 | 264 | 164 | 427 | 0 |
GO371467 | 240 | 164 | 403 | 0 |
GE476981 | 306 | 119 | 365 | 0 |
DR060732 | 240 | 218 | 457 | 0 |
GT739622 | 272 | 161 | 432 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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