y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G126400.2 |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 53115.1 Isoelectric Point: 5.0068 |
Chromosome | Chromosome/Scaffold: 10 Start: 26736040 End: 26741082 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 4.8e-31 |
CVAKDDASEGKLQDGLNWACGQGQANCSVIQSGQPCYLPNNTKNHASYAYNDYYQRMHTVGATCDFGGTATITSNDPSYRSC | |||
GH17 | 26 | 347 | 0 |
IGINIGTDVSSMPSASEVVSIIKTHRITHVRLYDADSHMLKALADSGIEVTVGVTNEEVLGIGESASAAAAWVNKNVASYVPSTNITAIAVGSEVLTSIP HAAPILVTAMNNLHKALVASNLNFQVKVSSPQPLDIIPEPFPPCTAAFNSSPNSTVYQLLQFLNNTNSYFMLNAYPYYGYTNGNGIFPIDYALFKPLPSV KQIVDPNTLFHYNSMFDVMVDATYYSMDALNFSGIPIVVTETGWPWQGGPNEPDATVENAGTFINYLIRRVSNDSGPPSRPNIPINTYIYELFNEDKRPG PVSEKNWGVLYTNGTAVFPLSF |
Full Sequence |
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Protein Sequence Length: 495 Download |
MNPDRCFGGS LLVLIGMFTN VLGAFIGINI GTDVSSMPSA SEVVSIIKTH RITHVRLYDA 60 DSHMLKALAD SGIEVTVGVT NEEVLGIGES ASAAAAWVNK NVASYVPSTN ITAIAVGSEV 120 LTSIPHAAPI LVTAMNNLHK ALVASNLNFQ VKVSSPQPLD IIPEPFPPCT AAFNSSPNST 180 VYQLLQFLNN TNSYFMLNAY PYYGYTNGNG IFPIDYALFK PLPSVKQIVD PNTLFHYNSM 240 FDVMVDATYY SMDALNFSGI PIVVTETGWP WQGGPNEPDA TVENAGTFIN YLIRRVSNDS 300 GPPSRPNIPI NTYIYELFNE DKRPGPVSEK NWGVLYTNGT AVFPLSFSGS SQIMGNATTV 360 FCVAKDDASE GKLQDGLNWA CGQGQANCSV IQSGQPCYLP NNTKNHASYA YNDYYQRMHT 420 VGATCDFGGT ATITSNDPSY RSCIFTGSSN SSAREGLLPP GAFGPVSPLG ESMKLLVSKV 480 RYVISAACLL IILL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 36 | 338 | 313 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-20 | 362 | 432 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 361 | 445 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-81 | 26 | 347 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 37 | 470 | 1 | 435 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 27 | 448 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 23 | 470 | 23 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 27 | 467 | 27 | 467 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 37 | 494 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 2.8026e-45 | 26 | 348 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 2.8026e-45 | 26 | 348 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 2.8026e-45 | 26 | 348 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 2.8026e-45 | 26 | 348 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |