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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3405274_bin.1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Clostridium
→
Species
Clostridium sp018372555
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3405274_bin.1 3,635,226 98.79% 0.564% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3405274_bin.1_CGC62 CGCFAM_00012 Yes 4 1 host glycan/beta-glucan
ShaoY_2019_ERR3405274_bin.1_CGC27 CGCFAM_00020 Yes 8 2 host glycan/beta-glucan
ShaoY_2019_ERR3405274_bin.1_CGC9 CGCFAM_00020 Yes 6 1 host glycan/beta-glucan
ShaoY_2019_ERR3405274_bin.1_CGC51 CGCFAM_00036 Yes 10 5
ShaoY_2019_ERR3405274_bin.1_CGC50 CGCFAM_00040 Yes 5 3
ShaoY_2019_ERR3405274_bin.1_CGC36 CGCFAM_00190 Yes 5 1
ShaoY_2019_ERR3405274_bin.1_CGC5 CGCFAM_00195 Yes 8 3
ShaoY_2019_ERR3405274_bin.1_CGC42 CGCFAM_00276 Yes 3 1
ShaoY_2019_ERR3405274_bin.1_CGC61 CGCFAM_00276 Yes 4 2
ShaoY_2019_ERR3405274_bin.1_CGC54 CGCFAM_00508 Yes 3 1
ShaoY_2019_ERR3405274_bin.1_CGC52 CGCFAM_00931 Yes 3 2 alpha-glucan
ShaoY_2019_ERR3405274_bin.1_CGC18 CGCFAM_01265 Yes 4 1
ShaoY_2019_ERR3405274_bin.1_CGC16 CGCFAM_01825 Yes 9 3
ShaoY_2019_ERR3405274_bin.1_CGC25 CGCFAM_02824 Yes 10 1
ShaoY_2019_ERR3405274_bin.1_CGC34 CGCFAM_02957 Yes 10 5
ShaoY_2019_ERR3405274_bin.1_CGC11 CGCFAM_03817 Yes 6 2
ShaoY_2019_ERR3405274_bin.1_CGC43 CGCFAM_03869 Yes 8 1
ShaoY_2019_ERR3405274_bin.1_CGC21 CGCFAM_03938 Yes 3 1
ShaoY_2019_ERR3405274_bin.1_CGC7 CGCFAM_05354 Yes 14 1
ShaoY_2019_ERR3405274_bin.1_CGC48 CGCFAM_05574 Yes 9 3
ShaoY_2019_ERR3405274_bin.1_CGC63 CGCFAM_05706 Yes 22 7
ShaoY_2019_ERR3405274_bin.1_CGC1 CGCFAM_05891 Yes 11 1
ShaoY_2019_ERR3405274_bin.1_CGC20 CGCFAM_06046 Yes 9 1
ShaoY_2019_ERR3405274_bin.1_CGC55 CGCFAM_06893 Yes 3 2
ShaoY_2019_ERR3405274_bin.1_CGC13 CGCFAM_08830 Yes 5 1
Top CAZyme Families