Cluster: ShaoY_2019_ERR3405274_bin.1_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00190
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_2785 | ShaoY_2019_ERR3405274_bin.1_k141_2785_3 | 2028 | 2972 | - | 3.A.1.2.12 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_2785 | ShaoY_2019_ERR3405274_bin.1_k141_2785_4 | 2972 | 4060 | - | 3.A.1.2.17 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_2785 | ShaoY_2019_ERR3405274_bin.1_k141_2785_5 | 4060 | 5580 | - | 3.A.1.2.17 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_2785 | ShaoY_2019_ERR3405274_bin.1_k141_2785_6 | 5718 | 6806 | - | 3.A.1.2.10 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_2785 | ShaoY_2019_ERR3405274_bin.1_k141_2785_7 | 7651 | 8550 | - | CE4 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2785_3
Type: TC
Location: 2028 - 2972 (-)
Type: TC
Location: 2028 - 2972 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2785_4
Type: TC
Location: 2972 - 4060 (-)
Type: TC
Location: 2972 - 4060 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2785_5
Type: TC
Location: 4060 - 5580 (-)
Type: TC
Location: 4060 - 5580 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2785_6
Type: TC
Location: 5718 - 6806 (-)
Type: TC
Location: 5718 - 6806 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2785_7
Type: CAZyme
Location: 7651 - 8550 (-)
Type: CAZyme
Location: 7651 - 8550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.