Cluster: ShaoY_2019_ERR3405274_bin.1_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_03938
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_1681 | ShaoY_2019_ERR3405274_bin.1_k141_1681_1 | 3 | 5330 | - | CBM32 | CBM32 | CBM32 | GH84 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405274_bin.1_k141_1681 | ShaoY_2019_ERR3405274_bin.1_k141_1681_2 | 5859 | 7016 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_1681 | ShaoY_2019_ERR3405274_bin.1_k141_1681_3 | 7284 | 8573 | - | 2.A.40.1.1 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1681_1
Type: CAZyme
Location: 3 - 5330 (-)
Type: CAZyme
Location: 3 - 5330 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1681_2
Type:
Location: 5859 - 7016 (-)
Type:
Location: 5859 - 7016 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1681_3
Type: TC
Location: 7284 - 8573 (-)
Type: TC
Location: 7284 - 8573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.