PROTEIN: ShaoY_2019_ERR3405274_bin.1_k141_1681_2
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405274_bin.1_k141_1681_2.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405274_bin.1_k141_1681_2
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Protein Sequence
MKIKKPDYFD EFKCIADKCE DTCCAGWGIV VDDISYEKYQ KVEGDFGDYL RENIIEDEGD 60 NVFTLKGDRC SFLNDDNLCD IYKNIGEGGL CYTCRQYPRY LEEFGSLREI GLSLSCPEAC 120 RIILRSSKKC SFIIEEKDEE VTDYNDINPN IYINLMQCRK VVFDIIQDRS IDINVRCAII 180 LKFIDEVQDK IHGFEINSIK DVKDKYIDKE LVNSLISDLK DFNGRNDEKY NNVKEFFDIF 240 INLEHIKPND ILGLENAKRY FWHSENDKDI YMEINNEFNE YYKEKAYEFE QILVYYIYRY 300 FMKSVFDYDV LSKIKFAIVS YLMIKELAVV RYLENKEFSF EDMVDIAHTY SKDIEHLEEN 360 VDTLEELFES NEIFNLSNII IILLN 385
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q56106-F1-model_v4 | 1 | 385 | 4 | 401 | 0.8529 |
0.8875 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9KJV4-F1-model_v4 | 1 | 384 | 4 | 401 | 0.853 |
0.8896 |
| AF-Q56106-F1-model_v4 | 1 | 385 | 4 | 401 | 0.8529 |
0.8875 |