Cluster: ShaoY_2019_ERR3405274_bin.1_CGC52
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00931
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_4394 | ShaoY_2019_ERR3405274_bin.1_k141_4394_3 | 2234 | 3829 | + | 4.A.1.1.16 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4394 | ShaoY_2019_ERR3405274_bin.1_k141_4394_4 | 3871 | 5223 | + | GH4 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4394 | ShaoY_2019_ERR3405274_bin.1_k141_4394_5 | 5625 | 11234 | + | GH84 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4394_3
Type: TC
Location: 2234 - 3829 (+)
Type: TC
Location: 2234 - 3829 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4394_4
Type: CAZyme
Location: 3871 - 5223 (+)
Type: CAZyme
Location: 3871 - 5223 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4394_5
Type: CAZyme
Location: 5625 - 11234 (+)
Type: CAZyme
Location: 5625 - 11234 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.