Cluster: ShaoY_2019_ERR3405274_bin.1_CGC48
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_05574
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_2 | 1117 | 2187 | + | GT4 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_3 | 2319 | 2924 | + | 9.B.18.1.3 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_4 | 2941 | 4032 | + | GFO_IDH_MocA | OCD_Mu_crystall | GFO_IDH_MocA_C | Sacchrp_dh_NADP | NAD_binding_3 | GFO_IDH_MocA_C3 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_5 | 4153 | 5529 | + | GT4 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_6 | 5687 | 6274 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_7 | 6275 | 7171 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_8 | 7152 | 8180 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_9 | 8361 | 9632 | - | 2.A.26.1.5 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3934 | ShaoY_2019_ERR3405274_bin.1_k141_3934_10 | 9783 | 10925 | + | GT2 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_2
Type: CAZyme
Location: 1117 - 2187 (+)
Type: CAZyme
Location: 1117 - 2187 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_3
Type: TC
Location: 2319 - 2924 (+)
Type: TC
Location: 2319 - 2924 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_4
Type: pfam
Location: 2941 - 4032 (+)
Type: pfam
Location: 2941 - 4032 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_5
Type: CAZyme
Location: 4153 - 5529 (+)
Type: CAZyme
Location: 4153 - 5529 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_6
Type:
Location: 5687 - 6274 (+)
Type:
Location: 5687 - 6274 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_7
Type: TC
Location: 6275 - 7171 (+)
Type: TC
Location: 6275 - 7171 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_8
Type:
Location: 7152 - 8180 (+)
Type:
Location: 7152 - 8180 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_9
Type: TC
Location: 8361 - 9632 (-)
Type: TC
Location: 8361 - 9632 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3934_10
Type: CAZyme
Location: 9783 - 10925 (+)
Type: CAZyme
Location: 9783 - 10925 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.