Cluster: ShaoY_2019_ERR3405274_bin.1_CGC61
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00276
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_6210 | ShaoY_2019_ERR3405274_bin.1_k141_6210_9 | 6404 | 7732 | - | 4.A.3.2.8 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_6210 | ShaoY_2019_ERR3405274_bin.1_k141_6210_10 | 7750 | 8070 | - | 4.A.3.2.1 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_6210 | ShaoY_2019_ERR3405274_bin.1_k141_6210_11 | 8103 | 9197 | - | GH170 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_6210 | ShaoY_2019_ERR3405274_bin.1_k141_6210_12 | 9256 | 12285 | - | GH2 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6210_9
Type: TC
Location: 6404 - 7732 (-)
Type: TC
Location: 6404 - 7732 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6210_10
Type: TC
Location: 7750 - 8070 (-)
Type: TC
Location: 7750 - 8070 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6210_11
Type: CAZyme
Location: 8103 - 9197 (-)
Type: CAZyme
Location: 8103 - 9197 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6210_12
Type: CAZyme
Location: 9256 - 12285 (-)
Type: CAZyme
Location: 9256 - 12285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.