Cluster: ShaoY_2019_ERR3405274_bin.1_CGC55
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_06893
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4808 | ShaoY_2019_ERR3405274_bin.1_k141_4808_1 | 69 | 2216 | - | GH3 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_4808 | ShaoY_2019_ERR3405274_bin.1_k141_4808_2 | 2229 | 3623 | - | 4.A.1.2.1 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4808 | ShaoY_2019_ERR3405274_bin.1_k141_4808_3 | 3616 | 4989 | - | GH32 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4808_1
Type: CAZyme
Location: 69 - 2216 (-)
Type: CAZyme
Location: 69 - 2216 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4808_2
Type: TC
Location: 2229 - 3623 (-)
Type: TC
Location: 2229 - 3623 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4808_3
Type: CAZyme
Location: 3616 - 4989 (-)
Type: CAZyme
Location: 3616 - 4989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.