Cluster: ShaoY_2019_ERR3405274_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_01265
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_1363 | ShaoY_2019_ERR3405274_bin.1_k141_1363_2 | 1594 | 2835 | - | CE9 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_1363 | ShaoY_2019_ERR3405274_bin.1_k141_1363_3 | 2846 | 3607 | - | S6PP | S6PP | Hydrolase_3 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_1363 | ShaoY_2019_ERR3405274_bin.1_k141_1363_4 | 3794 | 5155 | - | Lyase_1 | ADSL_C |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_1363 | ShaoY_2019_ERR3405274_bin.1_k141_1363_5 | 5174 | 6757 | - | 4.A.1.1.3 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1363_2
Type: CAZyme
Location: 1594 - 2835 (-)
Type: CAZyme
Location: 1594 - 2835 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1363_3
Type: pfam
Location: 2846 - 3607 (-)
Type: pfam
Location: 2846 - 3607 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1363_4
Type: pfam
Location: 3794 - 5155 (-)
Type: pfam
Location: 3794 - 5155 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_1363_5
Type: TC
Location: 5174 - 6757 (-)
Type: TC
Location: 5174 - 6757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.