Cluster: ShaoY_2019_ERR3405274_bin.1_CGC42
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00276
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3174 | ShaoY_2019_ERR3405274_bin.1_k141_3174_27 | 31745 | 32050 | + | 4.A.3.2.2 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3174 | ShaoY_2019_ERR3405274_bin.1_k141_3174_28 | 32090 | 32410 | + | 4.A.3.2.2 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3174 | ShaoY_2019_ERR3405274_bin.1_k141_3174_29 | 32403 | 33215 | + | GH170 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3174_27
Type: TC
Location: 31745 - 32050 (+)
Type: TC
Location: 31745 - 32050 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3174_28
Type: TC
Location: 32090 - 32410 (+)
Type: TC
Location: 32090 - 32410 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3174_29
Type: CAZyme
Location: 32403 - 33215 (+)
Type: CAZyme
Location: 32403 - 33215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.