Cluster: ShaoY_2019_ERR3405274_bin.1_CGC50
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00040
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_7 | 5882 | 6601 | + | GT32 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_8 | 6736 | 7701 | + | GT2 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_9 | 7698 | 9146 | + | 2.A.66.2.16 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_10 | 9106 | 9588 | + | Glyco_tran_28_C |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_11 | 9591 | 10670 | + | GT4 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_7
Type: CAZyme
Location: 5882 - 6601 (+)
Type: CAZyme
Location: 5882 - 6601 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_8
Type: CAZyme
Location: 6736 - 7701 (+)
Type: CAZyme
Location: 6736 - 7701 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_9
Type: TC
Location: 7698 - 9146 (+)
Type: TC
Location: 7698 - 9146 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_10
Type: pfam
Location: 9106 - 9588 (+)
Type: pfam
Location: 9106 - 9588 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_11
Type: CAZyme
Location: 9591 - 10670 (+)
Type: CAZyme
Location: 9591 - 10670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.