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Cluster: ShaoY_2019_ERR3405274_bin.1_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_90 88593 89789 - 2.A.1.2.90
TC ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_91 90099 91970 + 4.A.1.2.11
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_92 92088 93494 + GH1
pfam ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_93 93523 94371 + PRD | PRD | CAT_RBD
pfam ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_94 94945 96294 + MatE | MatE
TC ShaoY_2019_ERR3405274_bin.1_k141_592 ShaoY_2019_ERR3405274_bin.1_k141_592_95 96622 97866 + 9.A.40.2.4
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_90
Type: TC
Location: 88593 - 89789 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_91
Type: TC
Location: 90099 - 91970 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_92
Type: CAZyme
Location: 92088 - 93494 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_93
Type: pfam
Location: 93523 - 94371 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_94
Type: pfam
Location: 94945 - 96294 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_95
Type: TC
Location: 96622 - 97866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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