Cluster: ShaoY_2019_ERR3405274_bin.1_CGC62
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- CGC Family ID: CGCFAM_00012
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_6267 | ShaoY_2019_ERR3405274_bin.1_k141_6267_2 | 477 | 1919 | + | GH1 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_6267 | ShaoY_2019_ERR3405274_bin.1_k141_6267_3 | 1947 | 2252 | + | 4.A.3.2.8 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_6267 | ShaoY_2019_ERR3405274_bin.1_k141_6267_4 | 2295 | 3632 | + | 4.A.3.2.9 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_6267 | ShaoY_2019_ERR3405274_bin.1_k141_6267_5 | 3657 | 3971 | + | 4.A.3.2.2 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6267_2
Type: CAZyme
Location: 477 - 1919 (+)
Type: CAZyme
Location: 477 - 1919 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6267_3
Type: TC
Location: 1947 - 2252 (+)
Type: TC
Location: 1947 - 2252 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6267_4
Type: TC
Location: 2295 - 3632 (+)
Type: TC
Location: 2295 - 3632 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_6267_5
Type: TC
Location: 3657 - 3971 (+)
Type: TC
Location: 3657 - 3971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.