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Genome Details

Selected Rep_genome_ID: Rep_231
Total Genomes Found: 32
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella copri_G
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
B127.CMAG_7 3,591,517 98.65% 1.18% China(Inner Mongolia) Asia IMGG
CGMR041211 3,333,901 95.44% 0.51% China Asia CGMR
CGMR064940 2,644,421 90.54% 0.84% China Asia CGMR
DM123_bin.55 3,190,831 95.81% 0.51% NA Africa H3AfricaPhase2
GCA_021615735.1_ASM2161573v1_genomic 3,148,060 96.27% 0.84% NA Africa H3AfricaPhase1
GCA_021616565.1_ASM2161656v1_genomic 3,874,501 99.32% 2.37% NA Africa H3AfricaPhase1
GCA_021618535.1_ASM2161853v1_genomic 3,170,589 97.82% 1.63% NA Africa H3AfricaPhase1
GCA_021620825.1_ASM2162082v1_genomic 2,982,858 97.06% 1.01% NA Africa H3AfricaPhase1
GCA_021621545.1_ASM2162154v1_genomic 3,383,003 98.99% 2.2% NA Africa H3AfricaPhase1
GCA_021622185.1_ASM2162218v1_genomic 3,543,236 94.17% 2.87% NA Africa H3AfricaPhase1
GCA_021622245.1_ASM2162224v1_genomic 3,621,738 98.55% 2.03% NA Africa H3AfricaPhase1
GCA_021623045.1_ASM2162304v1_genomic 3,541,535 98.54% 1.35% NA Africa H3AfricaPhase1
GCA_021628325.1_ASM2162832v1_genomic 4,134,920 96.08% 3.1% NA Africa H3AfricaPhase1
GCA_021635485.1_ASM2163548v1_genomic 3,888,711 94.71% 3.41% NA Africa H3AfricaPhase1
HRGMv2_0179 3,437,908 98.81% 0.506% Malaysia Asia HRGM
KY199_bin.53 3,471,325 98.14% 0.68% NA Africa H3AfricaPhase2
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_11_CHE0005SZ.43 3,303,037 98.99% 0.68% NA Africa Hadza
Rep_231 3,575,693 98.9865% 0.675676% NA NA WIS
SPMP06_bin.60 3,289,249 92.36% 1.22% Singapore Asia SPMP
SPMP102_bin.8 2,899,157 92.76% 2.02% Singapore Asia SPMP
SPMP11_bin.67 2,903,902 91.19% 0.68% Singapore Asia SPMP
SPMP14_bin.32 3,406,468 97.64% 1.01% Singapore Asia SPMP
SPMP18_bin.121 3,580,908 97.51% 3.38% Singapore Asia SPMP
SPMP37_bin.34 3,133,965 96.16% 2.36% Singapore Asia SPMP
SPMP43_bin.97 2,907,639 91.84% 1.88% Singapore Asia SPMP
SPMP44_bin.143 3,753,528 96.75% 2.48% Singapore Asia SPMP
SPMP45_bin.219 3,134,129 94.59% 1.01% Singapore Asia SPMP
SPMP57_bin.99 3,332,917 95.67% 1.13% Singapore Asia SPMP
SPMP74_bin.93 2,977,583 95.33% 1.35% Singapore Asia SPMP
SPMP80_bin.65 2,914,898 95.21% 0.84% Singapore Asia SPMP
SPMP83_bin.75 3,191,653 94.6% 4.17% Singapore Asia SPMP
SPMP93_bin.64 2,749,465 92.31% 1.94% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_231_CGC38 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_231_CGC16 CGCFAM_00023 Yes 3 1
Rep_231_CGC50 CGCFAM_00031 Yes 12 2 pectin/galactan
Rep_231_CGC37 CGCFAM_00034 Yes 17 7
Rep_231_CGC48 CGCFAM_00044 Yes 13 4 beta-mannan/xylan/beta-glucan
Rep_231_CGC22 CGCFAM_00059 Yes 8 1
Rep_231_CGC7 CGCFAM_00082 Yes 9 2 beta-mannan
PUL0769_Rep_231_C0 CGCFAM_00108 Yes 7 3 pectin
Rep_231_CGC42 CGCFAM_00148 Yes 11 5
Rep_231_CGC45 CGCFAM_00186 Yes 11 5
Rep_231_CGC4 CGCFAM_00240 Yes 15 6 fructan
Rep_231_CGC17 CGCFAM_00241 Yes 8 5
Rep_231_CGC12 CGCFAM_00322 Yes 3 1
Rep_231_CGC28 CGCFAM_00551 Yes 4 1
Rep_231_CGC47 CGCFAM_01338 Yes 4 2
Rep_231_CGC44 CGCFAM_02279 Yes 6 4 alpha-mannan
Rep_231_CGC43 CGCFAM_02867 Yes 11 1
Rep_231_CGC20 CGCFAM_02869 Yes 9 4
Rep_231_CGC34 CGCFAM_02925 Yes 6 2
Rep_231_CGC46 CGCFAM_03361 Yes 9 1
Rep_231_CGC27 CGCFAM_03461 Yes 6 2
Rep_231_CGC9 CGCFAM_03517 Yes 16 9
Rep_231_CGC32 CGCFAM_05962 Yes 4 2
Rep_231_CGC36 CGCFAM_06311 Yes 11 1
Rep_231_CGC21 CGCFAM_09680 Yes 4 1
Top CAZyme Families