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Cluster: Rep_231_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_231_c_0 Rep_231_c_0_605 765136 767496 - 1.A.23.2.1
NULL(UNKNOWN) Rep_231_c_0 Rep_231_c_0_606 767673 768623 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_231_c_0 Rep_231_c_0_607 768821 770134 + GH5_4
CAZyme Rep_231_c_0 Rep_231_c_0_608 770276 771562 + GH5_7
CAZyme Rep_231_c_0 Rep_231_c_0_609 772528 773859 + CE7
CAZyme Rep_231_c_0 Rep_231_c_0_610 773864 775027 + GH26
CAZyme Rep_231_c_0 Rep_231_c_0_611 775041 776213 + GH130_1
TC Rep_231_c_0 Rep_231_c_0_612 776417 777760 + 2.A.2.3.5
Gene ID: Rep_231_c_0_605
Type: TC
Location: 765136 - 767496 (-)
Gene ID: Rep_231_c_0_606
Type:
Location: 767673 - 768623 (+)
Gene ID: Rep_231_c_0_607
Type: CAZyme
Location: 768821 - 770134 (+)
Gene ID: Rep_231_c_0_608
Type: CAZyme
Location: 770276 - 771562 (+)
Gene ID: Rep_231_c_0_609
Type: CAZyme
Location: 772528 - 773859 (+)
Gene ID: Rep_231_c_0_610
Type: CAZyme
Location: 773864 - 775027 (+)
Gene ID: Rep_231_c_0_611
Type: CAZyme
Location: 775041 - 776213 (+)
Gene ID: Rep_231_c_0_612
Type: TC
Location: 776417 - 777760 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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