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Cluster: Rep_231_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_231_c_0 Rep_231_c_0_2661 3211061 3212062 - GH130_2
CAZyme Rep_231_c_0 Rep_231_c_0_2662 3212111 3213598 - GH125
CAZyme Rep_231_c_0 Rep_231_c_0_2663 3213641 3215827 - GH92
CAZyme Rep_231_c_0 Rep_231_c_0_2664 3215858 3218161 - GH92
TC Rep_231_c_0 Rep_231_c_0_2665 3218180 3220018 - 8.A.46.2.2
TC Rep_231_c_0 Rep_231_c_0_2666 3220053 3223535 - 1.B.14.6.2
Gene ID: Rep_231_c_0_2661
Type: CAZyme
Location: 3211061 - 3212062 (-)
Gene ID: Rep_231_c_0_2662
Type: CAZyme
Location: 3212111 - 3213598 (-)
Gene ID: Rep_231_c_0_2663
Type: CAZyme
Location: 3213641 - 3215827 (-)
Gene ID: Rep_231_c_0_2664
Type: CAZyme
Location: 3215858 - 3218161 (-)
Gene ID: Rep_231_c_0_2665
Type: TC
Location: 3218180 - 3220018 (-)
Gene ID: Rep_231_c_0_2666
Type: TC
Location: 3220053 - 3223535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_231_c_0_2661 vegetarian > omnivore 2.57027 0.00290
Rep_231_c_0_2662 vegetarian > omnivore 1.05054 0.00290
Rep_231_c_0_2663 vegetarian > omnivore 1.11145 0.00290
Rep_231_c_0_2665 vegetarian > omnivore 2.68814 0.00290
Rep_231_c_0_2666 vegetarian > omnivore 2.72921 0.00290

🧭 Explore Read Mapping of CGC

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