Cluster: Rep_231_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- CGC Family ID: CGCFAM_00023
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_530 | 667930 | 669987 | - | 8.A.46.1.3 |
| TC | Rep_231_c_0 | Rep_231_c_0_531 | 670008 | 673316 | - | 1.B.14.6.1 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_532 | 673750 | 677130 | - | CE8 |
Gene ID: Rep_231_c_0_530
Type: TC
Location: 667930 - 669987 (-)
Type: TC
Location: 667930 - 669987 (-)
Gene ID: Rep_231_c_0_531
Type: TC
Location: 670008 - 673316 (-)
Type: TC
Location: 670008 - 673316 (-)
Gene ID: Rep_231_c_0_532
Type: CAZyme
Location: 673750 - 677130 (-)
Type: CAZyme
Location: 673750 - 677130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_231_c_0_532 | vegetarian > vegan | 1.26803 | 0.00951 |