Cluster: Rep_231_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- CGC Family ID: CGCFAM_01338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2764 | 3338469 | 3339698 | + | CE19 |
| pfam | Rep_231_c_0 | Rep_231_c_0_2765 | 3339861 | 3341228 | - | DUF3843 |
| TC | Rep_231_c_0 | Rep_231_c_0_2766 | 3341468 | 3343414 | + | 3.A.18.1.1 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2767 | 3343622 | 3346393 | + | GH2 |
Gene ID: Rep_231_c_0_2764
Type: CAZyme
Location: 3338469 - 3339698 (+)
Type: CAZyme
Location: 3338469 - 3339698 (+)
Gene ID: Rep_231_c_0_2765
Type: pfam
Location: 3339861 - 3341228 (-)
Type: pfam
Location: 3339861 - 3341228 (-)
Gene ID: Rep_231_c_0_2766
Type: TC
Location: 3341468 - 3343414 (+)
Type: TC
Location: 3341468 - 3343414 (+)
Gene ID: Rep_231_c_0_2767
Type: CAZyme
Location: 3343622 - 3346393 (+)
Type: CAZyme
Location: 3343622 - 3346393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.