Cluster: PUL0769_Rep_231_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: Rep_231
- CGC Family ID: CGCFAM_00108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0769_Rep_231_C0 | Rep_231_c_0_2343 | 2784886 | 2787327 | + | GH51_2 |
| CAZyme | PUL0769_Rep_231_C0 | Rep_231_c_0_2346 | 2789405 | 2790415 | - | GH43_5 |
| CAZyme | PUL0769_Rep_231_C0 | Rep_231_c_0_2347 | 2790541 | 2792199 | - | GH43_4 |
| pfam | PUL0769_Rep_231_C0 | Rep_231_c_0_2348 | 2792331 | 2794142 | - | Big_3 |
| pfam | PUL0769_Rep_231_C0 | Rep_231_c_0_2349 | 2794228 | 2795985 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0769_Rep_231_C0 | Rep_231_c_0_2350 | 2796038 | 2799244 | - | 1.B.14.6.1 |
| TF | PUL0769_Rep_231_C0 | Rep_231_c_0_2351 | 2799611 | 2802601 | - | HTH_AraC | HTH_AraC |
Gene ID: Rep_231_c_0_2343
Type: CAZyme
Location: 2784886 - 2787327 (+)
Type: CAZyme
Location: 2784886 - 2787327 (+)
Gene ID: Rep_231_c_0_2346
Type: CAZyme
Location: 2789405 - 2790415 (-)
Type: CAZyme
Location: 2789405 - 2790415 (-)
Gene ID: Rep_231_c_0_2347
Type: CAZyme
Location: 2790541 - 2792199 (-)
Type: CAZyme
Location: 2790541 - 2792199 (-)
Gene ID: Rep_231_c_0_2348
Type: pfam
Location: 2792331 - 2794142 (-)
Type: pfam
Location: 2792331 - 2794142 (-)
Gene ID: Rep_231_c_0_2349
Type: pfam
Location: 2794228 - 2795985 (-)
Type: pfam
Location: 2794228 - 2795985 (-)
Gene ID: Rep_231_c_0_2350
Type: TC
Location: 2796038 - 2799244 (-)
Type: TC
Location: 2796038 - 2799244 (-)
Gene ID: Rep_231_c_0_2351
Type: TF
Location: 2799611 - 2802601 (-)
Type: TF
Location: 2799611 - 2802601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Composition
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