Cluster: Rep_231_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- CGC Family ID: CGCFAM_03461
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1631 | 1888282 | 1890840 | - | GT35 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1632 | 1890946 | 1892607 | - | GT3 |
| NULL(UNKNOWN) | Rep_231_c_0 | Rep_231_c_0_1633 | 1892794 | 1893165 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_231_c_0 | Rep_231_c_0_1634 | 1898940 | 1900637 | + | 2.A.53.3.9 |
| TC | Rep_231_c_0 | Rep_231_c_0_1635 | 1900780 | 1901511 | - | 3.A.1.3.25 |
| TC | Rep_231_c_0 | Rep_231_c_0_1636 | 1901552 | 1903111 | - | 3.A.1.3.15 |
Gene ID: Rep_231_c_0_1631
Type: CAZyme
Location: 1888282 - 1890840 (-)
Type: CAZyme
Location: 1888282 - 1890840 (-)
Gene ID: Rep_231_c_0_1632
Type: CAZyme
Location: 1890946 - 1892607 (-)
Type: CAZyme
Location: 1890946 - 1892607 (-)
Gene ID: Rep_231_c_0_1633
Type:
Location: 1892794 - 1893165 (+)
Type:
Location: 1892794 - 1893165 (+)
Gene ID: Rep_231_c_0_1634
Type: TC
Location: 1898940 - 1900637 (+)
Type: TC
Location: 1898940 - 1900637 (+)
Gene ID: Rep_231_c_0_1635
Type: TC
Location: 1900780 - 1901511 (-)
Type: TC
Location: 1900780 - 1901511 (-)
Gene ID: Rep_231_c_0_1636
Type: TC
Location: 1901552 - 1903111 (-)
Type: TC
Location: 1901552 - 1903111 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.