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Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si001402m |
Family | GT8 |
Protein Properties | Length: 454 Molecular Weight: 50637.1 Isoelectric Point: 6.8313 |
Chromosome | Chromosome/Scaffold: 5 Start: 35762731 End: 35765054 |
Description | galacturonosyltransferase 15 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 88 | 409 | 0 |
CLTLRLAEEFAVNSAARSPVPPPEHAPRLTDASYLHVALVTDNVLAAAVAVASAVRSAADPGRLVFHIVTDKKSYVPLHSWFALHPVSPAVVEVRGLHQF DWRDAGVIASVMRTVEEVQRSSLDYHQCDGSAEREHRRLEASKPSTFSLLNYLKIHLPEFFPELGRVMLLDDDVVVRKDLTGLWEQDLDGKVIGAVGAHE GGGICIDKTFGDHLNFSDPAVSGVHSSQCAWSWGINIVDLDAWRRTNVTETYQFWLQKNRESGFRLWQMASLPPALIAFDGRVQAIEPLWHLPGLGWRVP DPKLLEFAAVLHFSGPRKPWLE |
Full Sequence |
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Protein Sequence Length: 454 Download |
MKEWRRSHRE ATLLDPVVVE AAPDSLDALM AEMGAMLASY DARLDMEAVA IKMMAMLLKM 60 DRKVKSSRVR ALFNRHLASL GVPKSVHCLT LRLAEEFAVN SAARSPVPPP EHAPRLTDAS 120 YLHVALVTDN VLAAAVAVAS AVRSAADPGR LVFHIVTDKK SYVPLHSWFA LHPVSPAVVE 180 VRGLHQFDWR DAGVIASVMR TVEEVQRSSL DYHQCDGSAE REHRRLEASK PSTFSLLNYL 240 KIHLPEFFPE LGRVMLLDDD VVVRKDLTGL WEQDLDGKVI GAVGAHEGGG ICIDKTFGDH 300 LNFSDPAVSG VHSSQCAWSW GINIVDLDAW RRTNVTETYQ FWLQKNRESG FRLWQMASLP 360 PALIAFDGRV QAIEPLWHLP GLGWRVPDPK LLEFAAVLHF SGPRKPWLEV AFPELRQRWL 420 GHLNASDSFL QGCGVLEWQE LGTAEHRVGR EKN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02742 | PLN02742 | 4.0e-69 | 10 | 433 | 431 | + Probable galacturonosyltransferase | ||
cd06429 | GT8_like_1 | 8.0e-78 | 148 | 424 | 278 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
PLN02659 | PLN02659 | 2.0e-105 | 23 | 435 | 427 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 2.0e-112 | 23 | 437 | 430 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 3.0e-130 | 20 | 436 | 427 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34134.1 | 0 | 1 | 439 | 1 | 438 | unknown [Zea mays] |
GenBank | EEC71413.1 | 0 | 1 | 437 | 79 | 518 | hypothetical protein OsI_03591 [Oryza sativa Indica Group] |
RefSeq | NP_001044121.1 | 0 | 1 | 437 | 97 | 536 | Os01g0727100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147797.1 | 0 | 1 | 439 | 95 | 532 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002456278.1 | 0 | 1 | 439 | 33 | 473 | hypothetical protein SORBIDRAFT_03g033400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000003 | 235 | 407 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00004 | 235 | 407 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00004 | 235 | 407 | 80 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL897009 | 234 | 148 | 380 | 0 |
CB656533 | 248 | 3 | 250 | 0 |
FL902042 | 216 | 148 | 363 | 0 |
CA733384 | 207 | 211 | 411 | 0 |
DN208918 | 167 | 294 | 453 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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