y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 486584 |
Family | GT8 |
Protein Properties | Length: 674 Molecular Weight: 77337.6 Isoelectric Point: 9.9829 |
Chromosome | Chromosome/Scaffold: 5 Start: 20133558 End: 20137235 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 334 | 646 | 0 |
CLSMRLTIDYYLLSPEKRKFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMREYYFKADHPTSGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRF DKYLNFSNPHIARNFNPNACGWAYGMNMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYNPSIDRKDIENAAV VHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 674 Download |
MALKRGLSGV NRIRGSGGGS RSVLVLLIFF CVFAPLVFFV GRGVYIDSST DYSNASVKQN 60 LDWRERLAMQ SVRSLFSKEV LDVIATSTAD LGPLSLDSFK KNNLSASWRG GGVDTSFRHS 120 ENPTTPDFKS NILNEKRDSI SKDSSHQKVE TPTKIHRRQL REKRREIRAN ELVQHNDDTI 180 LKLENAAIER SKSVDSAVLG KYSIWRRENE NDNSDSNIRL MRDQVIMARV YSGIAKLKNK 240 NELLQELQAR LKDSQRVLGE STSDADLPRS AHEKLRAMGQ ALAKAKMQLY DCKLVTGKLR 300 AMLQTADEQV RSLKKQSTFL AQLAAKTIPN PIHCLSMRLT IDYYLLSPEK RKFPRSENLE 360 NPNLYHYALF SDNVLAASVV VNSTIMNAKD PSKHVFHLVT DKLNFGAMNM WFLLNPPGKA 420 TIHVENVDEF KWLNSSYCPV LRQLESAAMR EYYFKADHPT SGSSNLKYRN PKYLSMLNHL 480 RFYLPEVYPK LNKILFLDDD IIVQKDLTPL WEVNLNGKVN GAVETCGESF HRFDKYLNFS 540 NPHIARNFNP NACGWAYGMN MFDLKEWKKR DITGIYHKWQ NMNENRTLWK LGTLPPGLIT 600 FYGLTHPLNK AWHVLGLGYN PSIDRKDIEN AAVVHYNGNM KPWLELAMSK YRPYWTKYIK 660 FDHPYLRRCN LHE* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 81 | 673 | 614 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 94 | 671 | 592 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 213 | 672 | 465 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 259 | 670 | 421 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 214 | 673 | 463 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK62572.1 | 0 | 1 | 625 | 1 | 621 | AT3g61130/T20K12_30 [Arabidopsis thaliana] |
EMBL | CBI38820.1 | 0 | 1 | 673 | 1 | 681 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191672.1 | 0 | 1 | 673 | 1 | 673 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002272447.1 | 0 | 1 | 673 | 49 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002511763.1 | 0 | 71 | 673 | 95 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000008 | 470 | 643 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00002 | 470 | 643 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00002 | 470 | 643 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |