y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G073800.2 |
Family | GT8 |
Protein Properties | Length: 689 Molecular Weight: 78253.8 Isoelectric Point: 9.9713 |
Chromosome | Chromosome/Scaffold: 14 Start: 5947795 End: 5953040 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 346 | 661 | 0 |
CLSMRLTIDYYLLPLEKRKFPRSEDLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKANHPTSLSSGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTKLWSVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIARHFDPNSCGWAYGMNIFDLKVWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGYNPSIDRSEIEN AAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 689 Download |
MALKRGLSSS GVNKNRSGGG GGSRLPIILV IFFCFLSPLI FFVGRRLIIT SSSADQNNNN 60 NAVGSGKQQL DWRERLALQH VKPLFSKEVI DVIASSTADL GPLSLDSFRK NKLSASWKVI 120 GGETPVDNKA ASETNQTATV VKQEASKGKV DNISEDNARS GDTPAKLARR QLREKRREKR 180 VAELLRQDDE ATARLENAAI ERSKLVDGAV LGKYSIWRKE MDNENSDSTV RLMRDQMIMA 240 RVYLSIAKMK NKRDLLQELQ TRLKESQRAL GESSADSDLH PSAPGKLKAM GQVLSKAREQ 300 LYDCKLVTGK LRAMLQTADE QVRSLKKQST FLSQLAAKTV PNGIHCLSMR LTIDYYLLPL 360 EKRKFPRSED LENPNLYHYA LFSDNVLAAS VVVNSTIMNA KDSSKHVFHL VTDKLNFGAM 420 NMWFLLNPPG KATIHVENVD EFKWLNSSYC PVLRQLESAA MKEYYFKANH PTSLSSGSSN 480 LKYRNPKYLS MLNHLRFYLP QVYPKLDKIL FLDDDIVVQK DLTKLWSVDL NGKVNGAVET 540 CGESFHRFDK YLNFSNPHIA RHFDPNSCGW AYGMNIFDLK VWKKKDITGI YHKWQNMNED 600 RVLWKLGTLP PGLITFYNLT HPLQKSWHVL GLGYNPSIDR SEIENAAVVH YNGNMKPWLE 660 LAMTKYRPYW TKYIKYDHPY LRNCNLSE* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 90 | 688 | 616 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 187 | 686 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 225 | 687 | 472 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 227 | 685 | 479 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 226 | 688 | 466 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 65 | 688 | 56 | 681 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272447.1 | 0 | 65 | 688 | 104 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002302550.1 | 0 | 1 | 688 | 1 | 644 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002320745.1 | 0 | 1 | 688 | 1 | 687 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002511763.1 | 0 | 89 | 688 | 111 | 710 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00008 | 485 | 658 | 75 | 252 | A Chain A, Crystal Structure Analysis Of Clpb |
PDB | 1g9r_A | 0.00008 | 485 | 658 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0003 | 485 | 658 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |