y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra039149 |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 61199.4 Isoelectric Point: 9.0065 |
Chromosome | Chromosome/Scaffold: 05 Start: 23753925 End: 23756205 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 174 | 505 | 0 |
CLSLRLTDEYSSNAHARRQLPSPERLPVLSDNAYHHFVLATDNILAASVVVSSAVQSSSKPEKIVFHVITDKKTYAGMHSWFALNSVAPAIVEVKSVHQF DWLTRENVPVLEAVETHHGIRNYYHGNHIAGANLSETTPRKFASKLQSRSPKYISLLNHLRIYLPELFPNLDKVVFLDDDIVIQRDLSPLWDIDLHGKVN GAVETCRGEDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRTWRKTDIRETYHSWLKANLKSNLTMWKLGTLPPALIAFKGHVQAIDSSWH MLGLGYQSNTNIENVKKAAVIHYNGQSKPWLE |
Full Sequence |
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Protein Sequence Length: 534 Download |
MQLHISPSMR SLTISSSNEF FDSMKIKVAP PLISYRTLFH TILILAFLLP FVFILTALVT 60 LEGVNKCSSI DCLGRRLGPR LLGRVDDSEQ RLVRDFYKIL NEVSTQEIPD GLKLPNSFRQ 120 LVSDMKNNHY DAKTFSLVLR AMIEKFERDM RESKFAELMN KHFAASSIPK GIHCLSLRLT 180 DEYSSNAHAR RQLPSPERLP VLSDNAYHHF VLATDNILAA SVVVSSAVQS SSKPEKIVFH 240 VITDKKTYAG MHSWFALNSV APAIVEVKSV HQFDWLTREN VPVLEAVETH HGIRNYYHGN 300 HIAGANLSET TPRKFASKLQ SRSPKYISLL NHLRIYLPEL FPNLDKVVFL DDDIVIQRDL 360 SPLWDIDLHG KVNGAVETCR GEDEWVMSKR LRNYFNFSHP LIAKHLDPEE CAWAYGMNIF 420 DLRTWRKTDI RETYHSWLKA NLKSNLTMWK LGTLPPALIA FKGHVQAIDS SWHMLGLGYQ 480 SNTNIENVKK AAVIHYNGQS KPWLEIGFEH LRPFWTKYLN YSNDFIRSCH ILE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 5.0e-131 | 116 | 531 | 416 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 2.0e-134 | 129 | 531 | 410 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-173 | 1 | 532 | 542 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 533 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 531 | 532 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF26170.1 | 0 | 24 | 533 | 1 | 510 | AC008261_27 unknown protein [Arabidopsis thaliana] |
EMBL | CAC01746.1 | 0 | 1 | 533 | 44 | 572 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_001118545.1 | 0 | 1 | 533 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_186753.2 | 0 | 1 | 533 | 1 | 533 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_197051.2 | 0 | 1 | 533 | 1 | 532 | GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00000004 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00000004 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00000004 | 325 | 503 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |