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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb02g030820.1 |
Family | GT8 |
Protein Properties | Length: 684 Molecular Weight: 77790.7 Isoelectric Point: 9.3405 |
Chromosome | Chromosome/Scaffold: 2 Start: 65826631 End: 65831548 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 341 | 656 | 0 |
CLSMRLTIDYYLLPLEEWKFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNLNEDRALWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDS AAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 684 Download |
MPTPKQRLPY STSGGGGGGG RRAASSSAAL PPVVVLVFLF VVAPSLFFVA RNGGRGHVHV 60 ASDPKGKNVD QEAAAMKNLK SILPKEVFDA ITASQQESGT LSLDFFRNHA SPSWKTDDLV 120 TEKSMDVDDK AKAENSLPEH DLPTNRSPKD PDEHQVDKAA KVARRKLREK RREKRTMDLV 180 HKDDEARAKL ENAAIERSKA VDSAVLGKYS IWRKENENEN SDSTVRLMRD QVIMARVYSV 240 LAKSKNKNDL YQKLQTRIKE SQRAVGEASA DADLHHSAPE KIRAMGQVLS KAREELYDCM 300 AITQRLRAML QSADEQVRSL KKQSTFLSQL AAKTIPNSIH CLSMRLTIDY YLLPLEEWKF 360 PRSENLENPN LYHYALFSDN VLAASVVVNS TIMNAKEPEK HVFHLVTDKL NFGAMNMWFL 420 LNPPGKATIH VENVDEFKWL NSSYCPVLRQ LESAAMKEYY FKADRPTTLS AGSSNLKYRN 480 PKYLSMLNHL RFYLPEVYPK LDKILFLDDD IVVQKDLTGL WDVDLNGKVN GAVETCGESF 540 HRFDKYLNFS NPHIARNFDP NACGWAYGMN IFDLREWKKK DITGIYHKWQ NLNEDRALWK 600 LGTLPPGLLT FYKLTHPLDK SWHVLGLGYN PSIDRSEIDS AAVVHYNGNM KPWLELAMTK 660 YRPYWTKYIK YDHPYIRGCN LSE* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 176 | 683 | 508 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 182 | 681 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 220 | 682 | 468 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 226 | 680 | 461 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 221 | 683 | 466 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 57 | 683 | 49 | 681 | unnamed protein product [Vitis vinifera] |
GenBank | EEC84934.1 | 0 | 51 | 683 | 55 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
RefSeq | NP_001063757.1 | 0 | 51 | 683 | 55 | 695 | Os09g0531900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002272447.1 | 0 | 57 | 683 | 97 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002462717.1 | 0 | 1 | 683 | 1 | 683 | hypothetical protein SORBIDRAFT_02g030820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00002 | 480 | 653 | 75 | 252 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1g9r_A | 0.00002 | 480 | 653 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 462 | 589 | 45 | 176 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |